Difference between revisions of "TSS:Mm 101556.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109340.8:109 NM_027398:109 NM_001190885:109 NM_001290690:109 uc007ikp.2:109 uc007ikq.2:109 uc007iko.2:109 AK045948:109 AK014313:121 AK046398...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Kchip1.2= | ||
|all_trans=ENSMUST00000109340.8:109 NM_027398:109 NM_001190885:109 NM_001290690:109 uc007ikp.2:109 uc007ikq.2:109 uc007iko.2:109 AK045948:109 AK014313:121 AK046398:121 AK013657:132 ENSMUST00000065970.5:167 BC034241:167 DQ148493:167 ENSMUST00000101368.8:233 AY171234:233 AY647242:277 AB075041:479 | |all_trans=ENSMUST00000109340.8:109 NM_027398:109 NM_001190885:109 NM_001290690:109 uc007ikp.2:109 uc007ikq.2:109 uc007iko.2:109 AK045948:109 AK014313:121 AK046398:121 AK013657:132 ENSMUST00000065970.5:167 BC034241:167 DQ148493:167 ENSMUST00000101368.8:233 AY171234:233 AY647242:277 AB075041:479 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-118 | |distance_to_tss=-118 | ||
|end=33843713 | |end=33843713 | ||
| + | |end_of_center_position=33843704 | ||
|entrez_id=70357 | |entrez_id=70357 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=KCHIP1 | + | |gene_alias=KCHIP1 |
|gene_description=Kv channel-interacting protein 1 | |gene_description=Kv channel-interacting protein 1 | ||
|gene_id=70357 | |gene_id=70357 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=33843693 | |start=33843693 | ||
| + | |start_of_center_position=33843703 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109340.8 NM_027398 NM_001190885 NM_001290690 uc007ikp.2 uc007ikq.2 uc007iko.2 AK045948 | |transcript_name=ENSMUST00000109340.8 NM_027398 NM_001190885 NM_001290690 uc007ikp.2 uc007ikq.2 uc007iko.2 AK045948 | ||
Revision as of 23:03, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33843703 |
|---|---|
| End of the center position in the TSS region: | 33843704 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000109340.8 NM_027398 NM_001190885 NM_001290690 uc007ikp.2 uc007ikq.2 uc007iko.2 AK045948 |
|---|---|
| Distance: | 109 |
| Num_trans: | 18 |
| All_trans: | ENSMUST00000109340.8:109 NM_027398:109 NM_001190885:109 NM_001290690:109 uc007ikp.2:109 uc007ikq.2:109 uc007iko.2:109 AK045948:109 AK014313:121 AK046398:121 AK013657:132 ENSMUST00000065970.5:167 BC034241:167 DQ148493:167 ENSMUST00000101368.8:233 AY171234:233 AY647242:277 AB075041:479 |
TATA-Box annotation
| Distance to TSS: | -118 |
|---|---|
| Nearest PromoterID: | NM_001290690 |
| Entrez ID: | 70357 |
| Nearest Unigene: | Mm.252514 |
| Nearest Refseq: | NM_027398 |
| Nearest Ensembl: | ENSMUSG00000053519 |
| Gene Name: | Kv channel-interacting protein 1 |
| Gene Alias: | KCHIP1 |
| Gene Description: | Kv channel-interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
