Difference between revisions of "TSS:Mm 101560.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000154760.1:0 AK048178:0 NM_001190886:-34 uc007ikr.2:-34 AK081845:-34 DQ148494:-34 ENSMUST00000135034.1:159 AK082267:159 |chr=chr11 |cpg_percen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Kchip1.2= | ||
|all_trans=ENSMUST00000154760.1:0 AK048178:0 NM_001190886:-34 uc007ikr.2:-34 AK081845:-34 DQ148494:-34 ENSMUST00000135034.1:159 AK082267:159 | |all_trans=ENSMUST00000154760.1:0 AK048178:0 NM_001190886:-34 uc007ikr.2:-34 AK081845:-34 DQ148494:-34 ENSMUST00000135034.1:159 AK082267:159 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=40 | |distance_to_tss=40 | ||
|end=33993159 | |end=33993159 | ||
| + | |end_of_center_position=33993153 | ||
|entrez_id=70357 | |entrez_id=70357 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=KCHIP1 | + | |gene_alias=KCHIP1 |
|gene_description=Kv channel-interacting protein 1 | |gene_description=Kv channel-interacting protein 1 | ||
|gene_id=70357 | |gene_id=70357 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=33993146 | |start=33993146 | ||
| + | |start_of_center_position=33993152 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000154760.1 AK048178 | |transcript_name=ENSMUST00000154760.1 AK048178 | ||
Revision as of 23:04, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 33993152 |
|---|---|
| End of the center position in the TSS region: | 33993153 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000154760.1 AK048178 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000154760.1:0 AK048178:0 NM_001190886:-34 uc007ikr.2:-34 AK081845:-34 DQ148494:-34 ENSMUST00000135034.1:159 AK082267:159 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_001190886 |
| Entrez ID: | 70357 |
| Nearest Unigene: | Mm.252514 |
| Nearest Refseq: | NM_027398 |
| Nearest Ensembl: | ENSMUSG00000053519 |
| Gene Name: | Kv channel-interacting protein 1 |
| Gene Alias: | KCHIP1 |
| Gene Description: | Kv channel-interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
