Difference between revisions of "TSS:Mm 101570.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC040427:-324 BC062272:-329 |chr=chr11 |cpg_percent=0.005 |distance=-324 |distance_to_tss=-19278 |end=34227380 |entrez_id=14233 |gc_percent=0.393035 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FREAC6= | ||
| + | |Fkh10= | ||
| + | |HFH-3= | ||
| + | |Hfh3= | ||
|all_trans=BC040427:-324 BC062272:-329 | |all_trans=BC040427:-324 BC062272:-329 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-19278 | |distance_to_tss=-19278 | ||
|end=34227380 | |end=34227380 | ||
| + | |end_of_center_position=34227367 | ||
|entrez_id=14233 | |entrez_id=14233 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=5830401E05Rik | + | |gene_alias=5830401E05Rik |
|gene_description=forkhead box I1 | |gene_description=forkhead box I1 | ||
|gene_id=94176 | |gene_id=94176 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=34227353 | |start=34227353 | ||
| + | |start_of_center_position=34227366 | ||
|strand=- | |strand=- | ||
|tata_box="24(GCACTTAAAAGA,-,0.00)" | |tata_box="24(GCACTTAAAAGA,-,0.00)" | ||
Revision as of 23:08, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 34227366 |
|---|---|
| End of the center position in the TSS region: | 34227367 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC040427 |
|---|---|
| Distance: | -324 |
| Num_trans: | 2 |
| All_trans: | BC040427:-324 BC062272:-329 |
TATA-Box annotation
| Distance to TSS: | -19278 |
|---|---|
| Nearest PromoterID: | NM_023907 |
| Entrez ID: | 14233 |
| Nearest Unigene: | Mm.32926 |
| Nearest Refseq: | NM_023907 |
| Nearest Ensembl: | ENSMUSG00000047861 |
| Gene Name: | dedicator of cyto-kinesis 2 |
| Gene Alias: | 5830401E05Rik |
| Gene Description: | forkhead box I1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "24(GCACTTAAAAGA,-,0.00)" |
