Difference between revisions of "TSS:Mm 101603.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000093193.11:0 ENSMUST00000101365.8:0 ENSMUST00000154178.1:0 ENSMUST00000143540.7:0 AK089682:0 AK037611:0 AK089228:0 AK157336:0 NM_033374:-5 uc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW122239= | ||
| + | |CED-5= | ||
| + | |Hch= | ||
| + | |MBC= | ||
|all_trans=ENSMUST00000093193.11:0 ENSMUST00000101365.8:0 ENSMUST00000154178.1:0 ENSMUST00000143540.7:0 AK089682:0 AK037611:0 AK089228:0 AK157336:0 NM_033374:-5 uc033fuj.1:-5 uc029rlg.2:-5 | |all_trans=ENSMUST00000093193.11:0 ENSMUST00000101365.8:0 ENSMUST00000154178.1:0 ENSMUST00000143540.7:0 AK089682:0 AK037611:0 AK089228:0 AK157336:0 NM_033374:-5 uc033fuj.1:-5 uc029rlg.2:-5 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=30 | |distance_to_tss=30 | ||
|end=34783900 | |end=34783900 | ||
| + | |end_of_center_position=34783876 | ||
|entrez_id=94176 | |entrez_id=94176 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=AI662014 | + | |gene_alias=AI662014 |
|gene_description=dedicator of cyto-kinesis 2 | |gene_description=dedicator of cyto-kinesis 2 | ||
|gene_id=94176 | |gene_id=94176 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=34783850 | |start=34783850 | ||
| + | |start_of_center_position=34783875 | ||
|strand=- | |strand=- | ||
|tata_box="-50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00)" | |tata_box="-50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00)" | ||
Revision as of 23:12, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 34783875 |
|---|---|
| End of the center position in the TSS region: | 34783876 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000093193.11 ENSMUST00000101365.8 ENSMUST00000154178.1 ENSMUST00000143540.7 AK089682 AK037611 AK089228 AK157336 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000093193.11:0 ENSMUST00000101365.8:0 ENSMUST00000154178.1:0 ENSMUST00000143540.7:0 AK089682:0 AK037611:0 AK089228:0 AK157336:0 NM_033374:-5 uc033fuj.1:-5 uc029rlg.2:-5 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_033374 |
| Entrez ID: | 94176 |
| Nearest Unigene: | Mm.380679 |
| Nearest Refseq: | NM_033374 |
| Nearest Ensembl: | ENSMUSG00000020143 |
| Gene Name: | dedicator of cyto-kinesis 2 |
| Gene Alias: | AI662014 |
| Gene Description: | dedicator of cyto-kinesis 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00)" |
