Difference between revisions of "TSS:Mm 101627.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK149173:-221 |chr=chr11 |cpg_percent=0.035 |distance=-221 |distance_to_tss=-27630 |end=36007726 |entrez_id=211652 |gc_percent=0.358209 |gene_alias=AA40...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AU017197= | ||
| + | |BC037006= | ||
| + | |Kibra= | ||
|all_trans=AK149173:-221 | |all_trans=AK149173:-221 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-27630 | |distance_to_tss=-27630 | ||
|end=36007726 | |end=36007726 | ||
| + | |end_of_center_position=36007720 | ||
|entrez_id=211652 | |entrez_id=211652 | ||
|gc_percent=0.358209 | |gc_percent=0.358209 | ||
| − | |gene_alias=AA408228 | + | |gene_alias=AA408228 |
|gene_description="WW, C2 and coiled-coil domain containing 1" | |gene_description="WW, C2 and coiled-coil domain containing 1" | ||
|gene_id=23964 | |gene_id=23964 | ||
| Line 17: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1345184 | |hgnc_mgi_id=MGI:1345184 | ||
| + | |mKIAA0869= | ||
|nearest_ensembl=ENSMUSG00000018849 | |nearest_ensembl=ENSMUSG00000018849 | ||
|nearest_promoter_id=NM_170779 | |nearest_promoter_id=NM_170779 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=36007712 | |start=36007712 | ||
| + | |start_of_center_position=36007719 | ||
|strand=- | |strand=- | ||
|transcript_name=AK149173 | |transcript_name=AK149173 | ||
Revision as of 23:16, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 36007719 |
|---|---|
| End of the center position in the TSS region: | 36007720 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK149173 |
|---|---|
| Distance: | -221 |
| Num_trans: | 1 |
| All_trans: | AK149173:-221 |
TATA-Box annotation
| Distance to TSS: | -27630 |
|---|---|
| Nearest PromoterID: | NM_170779 |
| Entrez ID: | 211652 |
| Nearest Unigene: | Mm.31267 |
| Nearest Refseq: | NM_170779 |
| Nearest Ensembl: | ENSMUSG00000018849 |
| Gene Name: | teneurin transmembrane protein 2 |
| Gene Alias: | AA408228 |
| Gene Description: | "WW, C2 and coiled-coil domain containing 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.358209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
