Difference between revisions of "TSS:Mm 101642.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.035 |distance= |distance_to_tss=-453020 |end=36433114 |entrez_id=211652 |gc_percent=0.447761 |gene_alias=AA408228|AU017197|BC037006|Kibra...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AU017197= | ||
| + | |BC037006= | ||
| + | |Kibra= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 5: | Line 8: | ||
|distance_to_tss=-453020 | |distance_to_tss=-453020 | ||
|end=36433114 | |end=36433114 | ||
| + | |end_of_center_position=36433109 | ||
|entrez_id=211652 | |entrez_id=211652 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=AA408228 | + | |gene_alias=AA408228 |
|gene_description="WW, C2 and coiled-coil domain containing 1" | |gene_description="WW, C2 and coiled-coil domain containing 1" | ||
|gene_name=Wwc1 | |gene_name=Wwc1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA0869= | ||
|nearest_ensembl=ENSMUSG00000018849 | |nearest_ensembl=ENSMUSG00000018849 | ||
|nearest_promoter_id=NM_170779 | |nearest_promoter_id=NM_170779 | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=36433103 | |start=36433103 | ||
| + | |start_of_center_position=36433108 | ||
|strand=- | |strand=- | ||
|tata_box="69(CCTTTAAAATCC,+,0.00),79(CCTTTTATGGAG,+,0.00)" | |tata_box="69(CCTTTAAAATCC,+,0.00),79(CCTTTTATGGAG,+,0.00)" | ||
Revision as of 23:18, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 36433108 |
|---|---|
| End of the center position in the TSS region: | 36433109 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -453020 |
|---|---|
| Nearest PromoterID: | NM_170779 |
| Entrez ID: | 211652 |
| Nearest Unigene: | Mm.31267 |
| Nearest Refseq: | NM_170779 |
| Nearest Ensembl: | ENSMUSG00000018849 |
| Gene Name: | Wwc1 |
| Gene Alias: | AA408228 |
| Gene Description: | "WW, C2 and coiled-coil domain containing 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "69(CCTTTAAAATCC,+,0.00),79(CCTTTTATGGAG,+,0.00)" |
