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Difference between revisions of "TSS:Hg 103711.1"

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Line 6: Line 6:
 
|distance_to_tss=65
 
|distance_to_tss=65
 
|end=6580515
 
|end=6580515
 +
|end_of_center_position=6580490
 
|entrez_id=439949
 
|entrez_id=439949
 
|gc_percent=0.800995
 
|gc_percent=0.800995
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=6580464
 
|start=6580464
 +
|start_of_center_position=6580489
 
|strand=+
 
|strand=+
 
|transcript_name=AY007155
 
|transcript_name=AY007155

Revision as of 23:21, 11 May 2019

Basic information about the TSS


TSS ID:hg_103711.1
Species:human
Chr:chr10
TSS Classification:yes
Start:6580464
End:6580515
Strand:+
TSS Score:1
Start of the center position in the TSS region:6580489
End of the center position in the TSS region:6580490



Gene and protein annotation


Transcript_name:AY007155
Distance:24
GeneID:439949
HGNC/MGI_ID:HGNC:44689
UniProt_ID:
Gene_name:PRKCQ antisense RNA 1
Gene_symbol:PRKCQ-AS1
Gene_synonyms:ENST00000414894.1
Gene_source:HGNC:44689



Transcript annotation


Transcript_name:AY007155
Distance:24
Num_trans:9
All_trans:AY007155:24 ENST00000455810.5:-40 NR_036503:-40 NR_036502:-40 uc021pmt.2:-40 ENST00000445427.1:-46 uc001ijl.4:-46 ENST00000613651.1:96 uc057rnj.1:96



TATA-Box annotation


Distance to TSS:65
Nearest PromoterID:NR_036502
Entrez ID:439949
Nearest Unigene:Hs.13262
Nearest Refseq:NR_036502
Nearest Ensembl:
Gene Name:PRKCQ antisense RNA 1
Gene Alias:-
Gene Description:PRKCQ antisense RNA 1
Gene Type:ncRNA
CpG%:0.125
GC%:0.800995
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):