Difference between revisions of "TSS:Mm 101705.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK136889:0 AK047085:0 AF233775:0 AF233776:0 AF233777:0 AF233778:0 AF233779:0 AF233780:0 AF233781:0 AF233782:0 AF233783:0 AF233784:0 AF233785:0 AF233786:...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gabrg-2= | ||
|all_trans=AK136889:0 AK047085:0 AF233775:0 AF233776:0 AF233777:0 AF233778:0 AF233779:0 AF233780:0 AF233781:0 AF233782:0 AF233783:0 AF233784:0 AF233785:0 AF233786:0 AF233787:0 AF233788:0 AF233789:0 AF233790:0 AF233791:0 AF233792:0 AF233793:0 AF233794:0 AF233795:0 AF233796:0 AF233797:0 AF233798:0 AF233799:0 AF233800:0 AF233801:0 AF233802:0 AK141129:-12 ENSMUST00000109290.1:-14 AK049857:-14 M86572:-165 ENSMUST00000070735.9:-190 BC031762:-190 M62374:-336 AK034338:-342 NM_008073:-372 NM_177408:-372 uc007imb.2:-372 uc007imc.3:-372 uc007imd.2:-372 uc007ime.2:-372 | |all_trans=AK136889:0 AK047085:0 AF233775:0 AF233776:0 AF233777:0 AF233778:0 AF233779:0 AF233780:0 AF233781:0 AF233782:0 AF233783:0 AF233784:0 AF233785:0 AF233786:0 AF233787:0 AF233788:0 AF233789:0 AF233790:0 AF233791:0 AF233792:0 AF233793:0 AF233794:0 AF233795:0 AF233796:0 AF233797:0 AF233798:0 AF233799:0 AF233800:0 AF233801:0 AF233802:0 AK141129:-12 ENSMUST00000109290.1:-14 AK049857:-14 M86572:-165 ENSMUST00000070735.9:-190 BC031762:-190 M62374:-336 AK034338:-342 NM_008073:-372 NM_177408:-372 uc007imb.2:-372 uc007imc.3:-372 uc007imd.2:-372 uc007ime.2:-372 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=401 | |distance_to_tss=401 | ||
|end=42000342 | |end=42000342 | ||
| + | |end_of_center_position=42000314 | ||
|entrez_id=14406 | |entrez_id=14406 | ||
| + | |gamma2= | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=GABAA-R | + | |gene_alias=GABAA-R |
|gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" | |gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" | ||
|gene_id=14406 | |gene_id=14406 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=42000284 | |start=42000284 | ||
| + | |start_of_center_position=42000313 | ||
|strand=- | |strand=- | ||
|transcript_name=AK136889 AK047085 AF233775 AF233776 AF233777 AF233778 AF233779 AF233780 AF233781 AF233782 AF233783 AF233784 AF233785 AF233786 AF233787 AF233788 AF233789 AF233790 AF233791 AF233792 AF233793 AF233794 AF233795 AF233796 AF233797 AF233798 AF233799 AF233800 AF233801 AF233802 | |transcript_name=AK136889 AK047085 AF233775 AF233776 AF233777 AF233778 AF233779 AF233780 AF233781 AF233782 AF233783 AF233784 AF233785 AF233786 AF233787 AF233788 AF233789 AF233790 AF233791 AF233792 AF233793 AF233794 AF233795 AF233796 AF233797 AF233798 AF233799 AF233800 AF233801 AF233802 | ||
Revision as of 23:26, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42000313 |
|---|---|
| End of the center position in the TSS region: | 42000314 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK136889 AK047085 AF233775 AF233776 AF233777 AF233778 AF233779 AF233780 AF233781 AF233782 AF233783 AF233784 AF233785 AF233786 AF233787 AF233788 AF233789 AF233790 AF233791 AF233792 AF233793 AF233794 AF233795 AF233796 AF233797 AF233798 AF233799 AF233800 AF233801 AF233802 |
|---|---|
| Distance: | 0 |
| Num_trans: | 44 |
| All_trans: | AK136889:0 AK047085:0 AF233775:0 AF233776:0 AF233777:0 AF233778:0 AF233779:0 AF233780:0 AF233781:0 AF233782:0 AF233783:0 AF233784:0 AF233785:0 AF233786:0 AF233787:0 AF233788:0 AF233789:0 AF233790:0 AF233791:0 AF233792:0 AF233793:0 AF233794:0 AF233795:0 AF233796:0 AF233797:0 AF233798:0 AF233799:0 AF233800:0 AF233801:0 AF233802:0 AK141129:-12 ENSMUST00000109290.1:-14 AK049857:-14 M86572:-165 ENSMUST00000070735.9:-190 BC031762:-190 M62374:-336 AK034338:-342 NM_008073:-372 NM_177408:-372 uc007imb.2:-372 uc007imc.3:-372 uc007imd.2:-372 uc007ime.2:-372 |
TATA-Box annotation
| Distance to TSS: | 401 |
|---|---|
| Nearest PromoterID: | NM_177408 |
| Entrez ID: | 14406 |
| Nearest Unigene: | Mm.5309 |
| Nearest Refseq: | NM_008073 |
| Nearest Ensembl: | ENSMUSG00000020436 |
| Gene Name: | "gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" |
| Gene Alias: | GABAA-R |
| Gene Description: | "gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
