Difference between revisions of "TSS:Mm 101706.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=M86572:-26 ENSMUST00000070735.9:-51 BC031762:-51 ENSMUST00000109290.1:117 AK049857:117 AK141129:119 AF233775:143 AF233776:143 AF233777:143 AF233778:143...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gabrg-2= | ||
|all_trans=M86572:-26 ENSMUST00000070735.9:-51 BC031762:-51 ENSMUST00000109290.1:117 AK049857:117 AK141129:119 AF233775:143 AF233776:143 AF233777:143 AF233778:143 AF233779:143 AF233780:143 AF233781:143 AF233782:143 AF233783:143 AF233784:143 AF233785:143 AF233786:143 AF233787:143 AF233788:143 AF233789:143 AF233790:143 AF233791:143 AF233792:143 AF233793:143 AF233794:143 AF233795:143 AF233796:143 AF233797:143 AF233798:143 AF233799:143 AF233800:143 AF233801:143 AF233802:143 AK136889:154 AK047085:182 M62374:-197 AK034338:-203 NM_008073:-233 NM_177408:-233 uc007imb.2:-233 uc007imc.3:-233 uc007imd.2:-233 uc007ime.2:-233 ENSMUST00000070725.10:-376 | |all_trans=M86572:-26 ENSMUST00000070735.9:-51 BC031762:-51 ENSMUST00000109290.1:117 AK049857:117 AK141129:119 AF233775:143 AF233776:143 AF233777:143 AF233778:143 AF233779:143 AF233780:143 AF233781:143 AF233782:143 AF233783:143 AF233784:143 AF233785:143 AF233786:143 AF233787:143 AF233788:143 AF233789:143 AF233790:143 AF233791:143 AF233792:143 AF233793:143 AF233794:143 AF233795:143 AF233796:143 AF233797:143 AF233798:143 AF233799:143 AF233800:143 AF233801:143 AF233802:143 AK136889:154 AK047085:182 M62374:-197 AK034338:-203 NM_008073:-233 NM_177408:-233 uc007imb.2:-233 uc007imc.3:-233 uc007imd.2:-233 uc007ime.2:-233 ENSMUST00000070725.10:-376 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=237 | |distance_to_tss=237 | ||
|end=42000481 | |end=42000481 | ||
| + | |end_of_center_position=42000477 | ||
|entrez_id=14406 | |entrez_id=14406 | ||
| + | |gamma2= | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=GABAA-R | + | |gene_alias=GABAA-R |
|gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" | |gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" | ||
|gene_id=14406 | |gene_id=14406 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=42000472 | |start=42000472 | ||
| + | |start_of_center_position=42000476 | ||
|strand=- | |strand=- | ||
|transcript_name=M86572 | |transcript_name=M86572 | ||
Revision as of 23:26, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 42000476 |
|---|---|
| End of the center position in the TSS region: | 42000477 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | M86572 |
|---|---|
| Distance: | -26 |
| Num_trans: | 45 |
| All_trans: | M86572:-26 ENSMUST00000070735.9:-51 BC031762:-51 ENSMUST00000109290.1:117 AK049857:117 AK141129:119 AF233775:143 AF233776:143 AF233777:143 AF233778:143 AF233779:143 AF233780:143 AF233781:143 AF233782:143 AF233783:143 AF233784:143 AF233785:143 AF233786:143 AF233787:143 AF233788:143 AF233789:143 AF233790:143 AF233791:143 AF233792:143 AF233793:143 AF233794:143 AF233795:143 AF233796:143 AF233797:143 AF233798:143 AF233799:143 AF233800:143 AF233801:143 AF233802:143 AK136889:154 AK047085:182 M62374:-197 AK034338:-203 NM_008073:-233 NM_177408:-233 uc007imb.2:-233 uc007imc.3:-233 uc007imd.2:-233 uc007ime.2:-233 ENSMUST00000070725.10:-376 |
TATA-Box annotation
| Distance to TSS: | 237 |
|---|---|
| Nearest PromoterID: | NM_177408 |
| Entrez ID: | 14406 |
| Nearest Unigene: | Mm.5309 |
| Nearest Refseq: | NM_008073 |
| Nearest Ensembl: | ENSMUSG00000020436 |
| Gene Name: | "gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" |
| Gene Alias: | GABAA-R |
| Gene Description: | "gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
