Difference between revisions of "TSS:Mm 101707.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000070735.9:7 BC031762:7 M86572:32 M62374:-86 AK034338:-92 NM_008073:-122 NM_177408:-122 uc007imb.2:-122 uc007imc.3:-122 uc007imd.2:-122 uc007i...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gabrg-2= | ||
|all_trans=ENSMUST00000070735.9:7 BC031762:7 M86572:32 M62374:-86 AK034338:-92 NM_008073:-122 NM_177408:-122 uc007imb.2:-122 uc007imc.3:-122 uc007imd.2:-122 uc007ime.2:-122 ENSMUST00000109290.1:183 AK049857:183 AK141129:185 AF233775:209 AF233776:209 AF233777:209 AF233778:209 AF233779:209 AF233780:209 AF233781:209 AF233782:209 AF233783:209 AF233784:209 AF233785:209 AF233786:209 AF233787:209 AF233788:209 AF233789:209 AF233790:209 AF233791:209 AF233792:209 AF233793:209 AF233794:209 AF233795:209 AF233796:209 AF233797:209 AF233798:209 AF233799:209 AF233800:209 AF233801:209 AF233802:209 AK136889:220 AK047085:248 ENSMUST00000070725.10:-265 | |all_trans=ENSMUST00000070735.9:7 BC031762:7 M86572:32 M62374:-86 AK034338:-92 NM_008073:-122 NM_177408:-122 uc007imb.2:-122 uc007imc.3:-122 uc007imd.2:-122 uc007ime.2:-122 ENSMUST00000109290.1:183 AK049857:183 AK141129:185 AF233775:209 AF233776:209 AF233777:209 AF233778:209 AF233779:209 AF233780:209 AF233781:209 AF233782:209 AF233783:209 AF233784:209 AF233785:209 AF233786:209 AF233787:209 AF233788:209 AF233789:209 AF233790:209 AF233791:209 AF233792:209 AF233793:209 AF233794:209 AF233795:209 AF233796:209 AF233797:209 AF233798:209 AF233799:209 AF233800:209 AF233801:209 AF233802:209 AK136889:220 AK047085:248 ENSMUST00000070725.10:-265 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=149 | |distance_to_tss=149 | ||
|end=42000592 | |end=42000592 | ||
| + | |end_of_center_position=42000566 | ||
|entrez_id=14406 | |entrez_id=14406 | ||
| + | |gamma2= | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=GABAA-R | + | |gene_alias=GABAA-R |
|gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" | |gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" | ||
|gene_id=14406 | |gene_id=14406 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=42000538 | |start=42000538 | ||
| + | |start_of_center_position=42000565 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000070735.9 BC031762 | |transcript_name=ENSMUST00000070735.9 BC031762 | ||
Revision as of 23:26, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 42000565 |
|---|---|
| End of the center position in the TSS region: | 42000566 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000070735.9 BC031762 |
|---|---|
| Distance: | 7 |
| Num_trans: | 45 |
| All_trans: | ENSMUST00000070735.9:7 BC031762:7 M86572:32 M62374:-86 AK034338:-92 NM_008073:-122 NM_177408:-122 uc007imb.2:-122 uc007imc.3:-122 uc007imd.2:-122 uc007ime.2:-122 ENSMUST00000109290.1:183 AK049857:183 AK141129:185 AF233775:209 AF233776:209 AF233777:209 AF233778:209 AF233779:209 AF233780:209 AF233781:209 AF233782:209 AF233783:209 AF233784:209 AF233785:209 AF233786:209 AF233787:209 AF233788:209 AF233789:209 AF233790:209 AF233791:209 AF233792:209 AF233793:209 AF233794:209 AF233795:209 AF233796:209 AF233797:209 AF233798:209 AF233799:209 AF233800:209 AF233801:209 AF233802:209 AK136889:220 AK047085:248 ENSMUST00000070725.10:-265 |
TATA-Box annotation
| Distance to TSS: | 149 |
|---|---|
| Nearest PromoterID: | NM_177408 |
| Entrez ID: | 14406 |
| Nearest Unigene: | Mm.5309 |
| Nearest Refseq: | NM_008073 |
| Nearest Ensembl: | ENSMUSG00000020436 |
| Gene Name: | "gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" |
| Gene Alias: | GABAA-R |
| Gene Description: | "gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
