Difference between revisions of "TSS:Mm 101711.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000070725.10:13 NM_008073:156 NM_177408:156 uc007imb.2:156 uc007imc.3:156 uc007imd.2:156 uc007ime.2:156 AK034338:186 M62374:192 ENSMUST00000070...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Gabrg-2= | ||
|all_trans=ENSMUST00000070725.10:13 NM_008073:156 NM_177408:156 uc007imb.2:156 uc007imc.3:156 uc007imd.2:156 uc007ime.2:156 AK034338:186 M62374:192 ENSMUST00000070735.9:338 BC031762:338 M86572:363 | |all_trans=ENSMUST00000070725.10:13 NM_008073:156 NM_177408:156 uc007imb.2:156 uc007imc.3:156 uc007imd.2:156 uc007ime.2:156 AK034338:186 M62374:192 ENSMUST00000070735.9:338 BC031762:338 M86572:363 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-164 | |distance_to_tss=-164 | ||
|end=42000887 | |end=42000887 | ||
| + | |end_of_center_position=42000879 | ||
|entrez_id=14406 | |entrez_id=14406 | ||
| + | |gamma2= | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=GABAA-R | + | |gene_alias=GABAA-R |
|gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" | |gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" | ||
|gene_id=14406 | |gene_id=14406 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=42000869 | |start=42000869 | ||
| + | |start_of_center_position=42000878 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000070725.10 | |transcript_name=ENSMUST00000070725.10 | ||
Revision as of 23:26, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42000878 |
|---|---|
| End of the center position in the TSS region: | 42000879 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000070725.10 |
|---|---|
| Distance: | 13 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000070725.10:13 NM_008073:156 NM_177408:156 uc007imb.2:156 uc007imc.3:156 uc007imd.2:156 uc007ime.2:156 AK034338:186 M62374:192 ENSMUST00000070735.9:338 BC031762:338 M86572:363 |
TATA-Box annotation
| Distance to TSS: | -164 |
|---|---|
| Nearest PromoterID: | NM_008073 |
| Entrez ID: | 14406 |
| Nearest Unigene: | Mm.5309 |
| Nearest Refseq: | NM_008073 |
| Nearest Ensembl: | ENSMUSG00000020436 |
| Gene Name: | "gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" |
| Gene Alias: | GABAA-R |
| Gene Description: | "gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
