Difference between revisions of "TSS:Mm 101718.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=M86566:-19 AK039496:28 X61430:53 ENSMUST00000205546.1:77 ENSMUST00000207274.1:136 ENSMUST00000169305.2:-179 AK142450:-179 M63436:-317 BC132331:-325 BC13...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=670 | |distance_to_tss=670 | ||
|end=42182281 | |end=42182281 | ||
| + | |end_of_center_position=42182261 | ||
|entrez_id=14394 | |entrez_id=14394 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=42182239 | |start=42182239 | ||
| + | |start_of_center_position=42182260 | ||
|strand=- | |strand=- | ||
|transcript_name=M86566 | |transcript_name=M86566 | ||
Revision as of 23:27, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42182260 |
|---|---|
| End of the center position in the TSS region: | 42182261 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | M86566 |
|---|---|
| Distance: | -19 |
| Num_trans: | 11 |
| All_trans: | M86566:-19 AK039496:28 X61430:53 ENSMUST00000205546.1:77 ENSMUST00000207274.1:136 ENSMUST00000169305.2:-179 AK142450:-179 M63436:-317 BC132331:-325 BC137733:-328 AK020669:362 |
TATA-Box annotation
| Distance to TSS: | 670 |
|---|---|
| Nearest PromoterID: | NM_010250 |
| Entrez ID: | 14394 |
| Nearest Unigene: | Mm.439668 |
| Nearest Refseq: | NM_010250 |
| Nearest Ensembl: | ENSMUSG00000010803 |
| Gene Name: | "gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1" |
| Gene Alias: | Gabra-1 |
| Gene Description: | "gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
