Difference between revisions of "TSS:Mm 101721.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000169305.2:-23 AK142450:-23 M86566:90 M63436:-161 BC132331:-169 BC137733:-172 AK039496:178 X61430:203 ENSMUST00000205546.1:227 ENSMUST00000207...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=517 | |distance_to_tss=517 | ||
|end=42182437 | |end=42182437 | ||
| + | |end_of_center_position=42182414 | ||
|entrez_id=14394 | |entrez_id=14394 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=42182389 | |start=42182389 | ||
| + | |start_of_center_position=42182413 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000169305.2 AK142450 | |transcript_name=ENSMUST00000169305.2 AK142450 | ||
Revision as of 23:28, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 42182413 |
|---|---|
| End of the center position in the TSS region: | 42182414 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000169305.2 AK142450 |
|---|---|
| Distance: | -23 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000169305.2:-23 AK142450:-23 M86566:90 M63436:-161 BC132331:-169 BC137733:-172 AK039496:178 X61430:203 ENSMUST00000205546.1:227 ENSMUST00000207274.1:286 AK141596:-352 ENSMUST00000206085.1:-473 ENSMUST00000020707.11:-493 ENSMUST00000132971.2:-493 NM_010250:-493 uc007imf.2:-493 AK034095:-493 |
TATA-Box annotation
| Distance to TSS: | 517 |
|---|---|
| Nearest PromoterID: | NM_010250 |
| Entrez ID: | 14394 |
| Nearest Unigene: | Mm.439668 |
| Nearest Refseq: | NM_010250 |
| Nearest Ensembl: | ENSMUSG00000010803 |
| Gene Name: | "gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1" |
| Gene Alias: | Gabra-1 |
| Gene Description: | "gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
