Difference between revisions of "TSS:Mm 101729.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Gabra-6= | ||
|all_trans=ENSMUST00000020703.12:0 ENSMUST00000155218.8:0 AK135145:0 AK137331:0 ENSMUST00000109286.3:-16 NM_008068:-16 NM_001099641:-16 uc007img.2:-16 uc007imh.2:-16 X51986:38 BC145158:256 BC145702:256 AF256197:278 AF256198:278 | |all_trans=ENSMUST00000020703.12:0 ENSMUST00000155218.8:0 AK135145:0 AK137331:0 ENSMUST00000109286.3:-16 NM_008068:-16 NM_001099641:-16 uc007img.2:-16 uc007imh.2:-16 X51986:38 BC145158:256 BC145702:256 AF256197:278 AF256198:278 | ||
| + | |alpha6= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=21 | |distance_to_tss=21 | ||
|end=42321056 | |end=42321056 | ||
| + | |end_of_center_position=42321051 | ||
|entrez_id=14399 | |entrez_id=14399 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=GABA-ARalpha6 | + | |gene_alias=GABA-ARalpha6 |
|gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6" | |gene_description="gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6" | ||
|gene_id=14399 | |gene_id=14399 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=42321045 | |start=42321045 | ||
| + | |start_of_center_position=42321050 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000020703.12 ENSMUST00000155218.8 AK135145 AK137331 | |transcript_name=ENSMUST00000020703.12 ENSMUST00000155218.8 AK135145 AK137331 | ||
Revision as of 23:28, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 42321050 |
|---|---|
| End of the center position in the TSS region: | 42321051 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000020703.12 ENSMUST00000155218.8 AK135145 AK137331 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000020703.12:0 ENSMUST00000155218.8:0 AK135145:0 AK137331:0 ENSMUST00000109286.3:-16 NM_008068:-16 NM_001099641:-16 uc007img.2:-16 uc007imh.2:-16 X51986:38 BC145158:256 BC145702:256 AF256197:278 AF256198:278 |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NM_008068 |
| Entrez ID: | 14399 |
| Nearest Unigene: | Mm.4915 |
| Nearest Refseq: | NM_008068 |
| Nearest Ensembl: | ENSMUSG00000020428 |
| Gene Name: | "gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6" |
| Gene Alias: | GABA-ARalpha6 |
| Gene Description: | "gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
