Difference between revisions of "TSS:Mm 101734.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000144024.1:-18 |chr=chr11 |cpg_percent=0 |distance=-18 |distance_to_tss=63396 |end=43311070 |entrez_id=387164 |gc_percent=0.467662 |gene_alias...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=63396 | |distance_to_tss=63396 | ||
|end=43311070 | |end=43311070 | ||
| + | |end_of_center_position=43311065 | ||
|entrez_id=387164 | |entrez_id=387164 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=Mirn146 | + | |gene_alias=Mirn146 |
|gene_description=microRNA 146 | |gene_description=microRNA 146 | ||
|gene_id= | |gene_id= | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:3649954 | |hgnc_mgi_id=MGI:3649954 | ||
| + | |miR-146a= | ||
| + | |mmu-mir-146= | ||
|nearest_ensembl=ENSMUSG00000065601 | |nearest_ensembl=ENSMUSG00000065601 | ||
|nearest_promoter_id=NR_029558 | |nearest_promoter_id=NR_029558 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=43311059 | |start=43311059 | ||
| + | |start_of_center_position=43311064 | ||
|strand=- | |strand=- | ||
|tata_box="-32(GCTTTAAAACAA,+,0.00)" | |tata_box="-32(GCTTTAAAACAA,+,0.00)" | ||
Revision as of 23:30, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 43311064 |
|---|---|
| End of the center position in the TSS region: | 43311065 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000144024.1 |
|---|---|
| Distance: | -18 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000144024.1:-18 |
TATA-Box annotation
| Distance to TSS: | 63396 |
|---|---|
| Nearest PromoterID: | NR_029558 |
| Entrez ID: | 387164 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029558 |
| Nearest Ensembl: | ENSMUSG00000065601 |
| Gene Name: | predicted gene 12147 |
| Gene Alias: | Mirn146 |
| Gene Description: | microRNA 146 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(GCTTTAAAACAA,+,0.00)" |
