Difference between revisions of "TSS:Mm 101763.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_008375:0 uc007imt.2:0 ENSMUST00000020672.4:12 BC119289:20 BC120767:20 |chr=chr11 |cpg_percent=0.01 |distance=0 |distance_to_tss=3 |end=43601567 |entr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |I-15P= | ||
| + | |I-BABP= | ||
| + | |ILBP= | ||
| + | |ILBP3= | ||
| + | |Illbp= | ||
|all_trans=NM_008375:0 uc007imt.2:0 ENSMUST00000020672.4:12 BC119289:20 BC120767:20 | |all_trans=NM_008375:0 uc007imt.2:0 ENSMUST00000020672.4:12 BC119289:20 BC120767:20 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
|end=43601567 | |end=43601567 | ||
| + | |end_of_center_position=43601560 | ||
|entrez_id=16204 | |entrez_id=16204 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=GT | + | |gene_alias=GT |
|gene_description="fatty acid binding protein 6, ileal (gastrotropin)" | |gene_description="fatty acid binding protein 6, ileal (gastrotropin)" | ||
|gene_id=16204 | |gene_id=16204 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=43601551 | |start=43601551 | ||
| + | |start_of_center_position=43601559 | ||
|strand=- | |strand=- | ||
|tata_box="-35(GTGTTTATAAGC,-,0.00)" | |tata_box="-35(GTGTTTATAAGC,-,0.00)" | ||
Revision as of 23:34, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 43601559 |
|---|---|
| End of the center position in the TSS region: | 43601560 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_008375 uc007imt.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | NM_008375:0 uc007imt.2:0 ENSMUST00000020672.4:12 BC119289:20 BC120767:20 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_008375 |
| Entrez ID: | 16204 |
| Nearest Unigene: | Mm.142716 |
| Nearest Refseq: | NM_008375 |
| Nearest Ensembl: | ENSMUSG00000020405 |
| Gene Name: | "fatty acid binding protein 6, ileal (gastrotropin)" |
| Gene Alias: | GT |
| Gene Description: | "fatty acid binding protein 6, ileal (gastrotropin)" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GTGTTTATAAGC,-,0.00)" |
