Difference between revisions of "TSS:Mm 101765.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109278.7:0 ENSMUST00000048578.2:0 ENSMUST00000147984.1:0 NM_133795:0 uc007imx.1:0 AK077715:0 AK166431:0 BC010236:0 AK170032:0 AK170230:0 AK0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C79328= | ||
| + | |TPR1= | ||
|all_trans=ENSMUST00000109278.7:0 ENSMUST00000048578.2:0 ENSMUST00000147984.1:0 NM_133795:0 uc007imx.1:0 AK077715:0 AK166431:0 BC010236:0 AK170032:0 AK170230:0 AK019021:0 | |all_trans=ENSMUST00000109278.7:0 ENSMUST00000048578.2:0 ENSMUST00000147984.1:0 NM_133795:0 uc007imx.1:0 AK077715:0 AK166431:0 BC010236:0 AK170032:0 AK170230:0 AK019021:0 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-16 | |distance_to_tss=-16 | ||
|end=43748015 | |end=43748015 | ||
| + | |end_of_center_position=43747990 | ||
|entrez_id=66827 | |entrez_id=66827 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=4833412C19Rik | + | |gene_alias=4833412C19Rik |
|gene_description=tetratricopeptide repeat domain 1 | |gene_description=tetratricopeptide repeat domain 1 | ||
|gene_id=66827 | |gene_id=66827 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=43747963 | |start=43747963 | ||
| + | |start_of_center_position=43747989 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109278.7 ENSMUST00000048578.2 ENSMUST00000147984.1 NM_133795 uc007imx.1 AK077715 AK166431 BC010236 AK170032 AK170230 AK019021 | |transcript_name=ENSMUST00000109278.7 ENSMUST00000048578.2 ENSMUST00000147984.1 NM_133795 uc007imx.1 AK077715 AK166431 BC010236 AK170032 AK170230 AK019021 | ||
Revision as of 23:34, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 43747989 |
|---|---|
| End of the center position in the TSS region: | 43747990 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109278.7 ENSMUST00000048578.2 ENSMUST00000147984.1 NM_133795 uc007imx.1 AK077715 AK166431 BC010236 AK170032 AK170230 AK019021 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000109278.7:0 ENSMUST00000048578.2:0 ENSMUST00000147984.1:0 NM_133795:0 uc007imx.1:0 AK077715:0 AK166431:0 BC010236:0 AK170032:0 AK170230:0 AK019021:0 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_133795 |
| Entrez ID: | 66827 |
| Nearest Unigene: | Mm.271974 |
| Nearest Refseq: | NM_133795 |
| Nearest Ensembl: | ENSMUSG00000041278 |
| Gene Name: | tetratricopeptide repeat domain 1 |
| Gene Alias: | 4833412C19Rik |
| Gene Description: | tetratricopeptide repeat domain 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
