Difference between revisions of "TSS:Mm 101772.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK153998:0 AK043952:0 AK050031:0 AK172546:0 AK015910:28 AK147744:-36 ENSMUST00000102795.3:-39 NM_024475:-89 uc007ing.2:-89 |chr=chr11 |cpg_percent=0.13...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |8430435I17Rik= | ||
| + | |BC002236= | ||
|all_trans=AK153998:0 AK043952:0 AK050031:0 AK172546:0 AK015910:28 AK147744:-36 ENSMUST00000102795.3:-39 NM_024475:-89 uc007ing.2:-89 | |all_trans=AK153998:0 AK043952:0 AK050031:0 AK172546:0 AK015910:28 AK147744:-36 ENSMUST00000102795.3:-39 NM_024475:-89 uc007ing.2:-89 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=97 | |distance_to_tss=97 | ||
|end=44470459 | |end=44470459 | ||
| + | |end_of_center_position=44470451 | ||
|entrez_id=79560 | |entrez_id=79560 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=4930527B16Rik | + | |gene_alias=4930527B16Rik |
|gene_description=ubiquitin-like domain containing CTD phosphatase 1 | |gene_description=ubiquitin-like domain containing CTD phosphatase 1 | ||
|gene_id=79560 | |gene_id=79560 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=44470442 | |start=44470442 | ||
| + | |start_of_center_position=44470450 | ||
|strand=- | |strand=- | ||
|transcript_name=AK153998 AK043952 AK050031 AK172546 | |transcript_name=AK153998 AK043952 AK050031 AK172546 | ||
Revision as of 23:36, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 44470450 |
|---|---|
| End of the center position in the TSS region: | 44470451 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK153998 AK043952 AK050031 AK172546 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | AK153998:0 AK043952:0 AK050031:0 AK172546:0 AK015910:28 AK147744:-36 ENSMUST00000102795.3:-39 NM_024475:-89 uc007ing.2:-89 |
TATA-Box annotation
| Distance to TSS: | 97 |
|---|---|
| Nearest PromoterID: | NM_024475 |
| Entrez ID: | 79560 |
| Nearest Unigene: | Mm.338784 |
| Nearest Refseq: | NM_024475 |
| Nearest Ensembl: | ENSMUSG00000041231 |
| Gene Name: | ubiquitin-like domain containing CTD phosphatase 1 |
| Gene Alias: | 4930527B16Rik |
| Gene Description: | ubiquitin-like domain containing CTD phosphatase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
