Difference between revisions of "TSS:Hg 103844.1"
From referenceTSS
| Line 12: | Line 12: | ||
|distance_to_tss=109 | |distance_to_tss=109 | ||
|end=11005417 | |end=11005417 | ||
| + | |end_of_center_position=11005406 | ||
|entrez_id=10659 | |entrez_id=10659 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=BRUNOL3 | + | |gene_alias=BRUNOL3 |
|gene_description="CUGBP, Elav-like family member 2" | |gene_description="CUGBP, Elav-like family member 2" | ||
|gene_id=10659 | |gene_id=10659 | ||
| Line 30: | Line 31: | ||
|species=human | |species=human | ||
|start=11005393 | |start=11005393 | ||
| + | |start_of_center_position=11005405 | ||
|strand=+ | |strand=+ | ||
|tata_box="25(CTGCTTTTAAGG,-,0.00),27(GCTTTTAAGGTA,+,0.00)" | |tata_box="25(CTGCTTTTAAGG,-,0.00),27(GCTTTTAAGGTA,+,0.00)" | ||
Revision as of 23:40, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11005405 |
|---|---|
| End of the center position in the TSS region: | 11005406 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000631816.1 AK299548 |
|---|---|
| Distance: | -17 |
| Num_trans: | 9 |
| All_trans: | ENST00000631816.1:-17 AK299548:-17 ENST00000633200.1:-59 AK297380:-59 ENST00000631460.1:-70 ENST00000416382.6:-73 AF090693:-73 NM_001025077:-98 uc031vxc.2:-98 |
TATA-Box annotation
| Distance to TSS: | 109 |
|---|---|
| Nearest PromoterID: | NM_001025077 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | "CUGBP, Elav-like family member 2" |
| Gene Alias: | BRUNOL3 |
| Gene Description: | "CUGBP, Elav-like family member 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "25(CTGCTTTTAAGG,-,0.00),27(GCTTTTAAGGTA,+,0.00)" |
