Difference between revisions of "TSS:Mm 101784.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109254.1:-6 NM_001290737:-6 uc007inu.2:-6 uc007inw.1:-6 AK016076:-6 ENSMUST00000133851.1:8 AK007233:8 ENSMUST00000131182.1:-301 BC092541:-30...") |
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|distance_to_tss=15 | |distance_to_tss=15 | ||
|end=45955182 | |end=45955182 | ||
| + | |end_of_center_position=45955174 | ||
|entrez_id=66628 | |entrez_id=66628 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=45955164 | |start=45955164 | ||
| + | |start_of_center_position=45955173 | ||
|strand=- | |strand=- | ||
|tata_box="36(ATATTTAAAAGG,-,0.00)" | |tata_box="36(ATATTTAAAAGG,-,0.00)" | ||
Revision as of 23:43, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 45955173 |
|---|---|
| End of the center position in the TSS region: | 45955174 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109254.1 NM_001290737 uc007inu.2 uc007inw.1 AK016076 |
|---|---|
| Distance: | -6 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000109254.1:-6 NM_001290737:-6 uc007inu.2:-6 uc007inw.1:-6 AK016076:-6 ENSMUST00000133851.1:8 AK007233:8 ENSMUST00000131182.1:-301 BC092541:-301 AK017532:-303 BC115560:-309 BC115561:-309 ENSMUST00000011398.12:-312 AK010876:-312 NM_001080969:-321 uc007inv.2:-321 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NM_001290737 |
| Entrez ID: | 66628 |
| Nearest Unigene: | Mm.269083 |
| Nearest Refseq: | NM_001080969 |
| Nearest Ensembl: | ENSMUSG00000011254 |
| Gene Name: | tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) |
| Gene Alias: | - |
| Gene Description: | tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "36(ATATTTAAAAGG,-,0.00)" |
