Difference between revisions of "TSS:Mm 101794.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK203114:-405 AK205112:-405 AK005148:429 |chr=chr11 |cpg_percent=0.015 |distance=-405 |distance_to_tss=25949 |end=46196041 |entrez_id=102465715 |gc_perc...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=25949 | |distance_to_tss=25949 | ||
|end=46196041 | |end=46196041 | ||
| + | |end_of_center_position=46196036 | ||
|entrez_id=102465715 | |entrez_id=102465715 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=Gm27504 | + | |gene_alias=Gm27504 |
|gene_description=microRNA 7239 | |gene_description=microRNA 7239 | ||
|gene_id=76884 | |gene_id=76884 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:1924134 | |hgnc_mgi_id=MGI:1924134 | ||
| + | |mmu-mir-7239= | ||
|nearest_ensembl=ENSMUSG00000099331 | |nearest_ensembl=ENSMUSG00000099331 | ||
|nearest_promoter_id=NR_106098 | |nearest_promoter_id=NR_106098 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=46196030 | |start=46196030 | ||
| + | |start_of_center_position=46196035 | ||
|strand=- | |strand=- | ||
|transcript_name=AK203114 AK205112 | |transcript_name=AK203114 AK205112 | ||
Revision as of 23:45, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46196035 |
|---|---|
| End of the center position in the TSS region: | 46196036 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK203114 AK205112 |
|---|---|
| Distance: | -405 |
| Num_trans: | 3 |
| All_trans: | AK203114:-405 AK205112:-405 AK005148:429 |
TATA-Box annotation
| Distance to TSS: | 25949 |
|---|---|
| Nearest PromoterID: | NR_106098 |
| Entrez ID: | 102465715 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106098 |
| Nearest Ensembl: | ENSMUSG00000099331 |
| Gene Name: | cytoplasmic FMR1 interacting protein 2 |
| Gene Alias: | Gm27504 |
| Gene Description: | microRNA 7239 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
