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Difference between revisions of "TSS:Mm 101796.1"

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(Created page with "{{TSSDetail |all_trans=BC049232:-1 |chr=chr11 |cpg_percent=0.025 |distance=-1 |distance_to_tss=-10730 |end=46221409 |entrez_id=102465598 |gc_percent=0.562189 |gene_alias=Gm278...")
 
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|distance_to_tss=-10730
 
|distance_to_tss=-10730
 
|end=46221409
 
|end=46221409
 +
|end_of_center_position=46221405
 
|entrez_id=102465598
 
|entrez_id=102465598
 
|gc_percent=0.562189
 
|gc_percent=0.562189
|gene_alias=Gm27885|mmu-mir-6989
+
|gene_alias=Gm27885
 
|gene_description=microRNA 6989
 
|gene_description=microRNA 6989
 
|gene_id=76884
 
|gene_id=76884
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|gene_type=ncRNA
 
|gene_type=ncRNA
 
|hgnc_mgi_id=MGI:1924134
 
|hgnc_mgi_id=MGI:1924134
 +
|mmu-mir-6989=
 
|nearest_ensembl=ENSMUSG00000099230
 
|nearest_ensembl=ENSMUSG00000099230
 
|nearest_promoter_id=NR_105955
 
|nearest_promoter_id=NR_105955
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|species=mouse
 
|species=mouse
 
|start=46221400
 
|start=46221400
 +
|start_of_center_position=46221404
 
|strand=-
 
|strand=-
 
|transcript_name=BC049232
 
|transcript_name=BC049232

Revision as of 23:45, 11 May 2019

Basic information about the TSS


TSS ID:mm_101796.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:46221400
End:46221409
Strand:-
TSS Score:1
Start of the center position in the TSS region:46221404
End of the center position in the TSS region:46221405



Gene and protein annotation


Transcript_name:BC049232
Distance:-1
GeneID:76884
HGNC/MGI_ID:MGI:1924134
UniProt_ID:Q810V4
Gene_name:cytoplasmic FMR1 interacting protein 2
Gene_symbol:Cyfip2
Gene_synonyms:1500004I01Rik 6430511D02Rik Pir121
Gene_source:MGI:1924134



Transcript annotation


Transcript_name:BC049232
Distance:-1
Num_trans:1
All_trans:BC049232:-1



TATA-Box annotation


Distance to TSS:-10730
Nearest PromoterID:NR_105955
Entrez ID:102465598
Nearest Unigene:
Nearest Refseq:NR_105955
Nearest Ensembl:ENSMUSG00000099230
Gene Name:cytoplasmic FMR1 interacting protein 2
Gene Alias:Gm27885
Gene Description:microRNA 6989
Gene Type:ncRNA
CpG%:0.025
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):