Difference between revisions of "TSS:Hg 103938.1"
From referenceTSS
| Line 12: | Line 12: | ||
|distance_to_tss=122 | |distance_to_tss=122 | ||
|end=13100210 | |end=13100210 | ||
| + | |end_of_center_position=13100205 | ||
|entrez_id=10133 | |entrez_id=10133 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=ALS12 | + | |gene_alias=ALS12 |
|gene_description=optineurin | |gene_description=optineurin | ||
|gene_id=10133 | |gene_id=10133 | ||
| Line 30: | Line 31: | ||
|species=human | |species=human | ||
|start=13100198 | |start=13100198 | ||
| + | |start_of_center_position=13100204 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AF061034 | |transcript_name=AF061034 | ||
Revision as of 23:54, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13100204 |
|---|---|
| End of the center position in the TSS region: | 13100205 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF061034 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | AF061034:0 ENST00000378747.7:15 uc001ilv.2:15 AF420371:15 AF420372:15 AF420373:15 ENST00000430081.5:-26 ENST00000378752.7:-26 ENST00000378748.7:-26 uc057rtj.1:-26 uc001ilw.2:-26 uc001ily.2:-26 BC032762:-26 ENST00000378757.6:-30 uc001ilx.2:-30 BC013876:-30 ENST00000482140.5:-36 uc057rti.1:-36 ENST00000487935.1:-40 uc057rth.1:-40 AK303715:-41 AK316171:-63 NM_021980:-117 NM_001008213:-117 NM_001008212:-117 NM_001008211:-117 |
TATA-Box annotation
| Distance to TSS: | 122 |
|---|---|
| Nearest PromoterID: | NM_001008211 |
| Entrez ID: | 10133 |
| Nearest Unigene: | Hs.332706 |
| Nearest Refseq: | NM_021980 |
| Nearest Ensembl: | ENSG00000123240 |
| Gene Name: | optineurin |
| Gene Alias: | ALS12 |
| Gene Description: | optineurin |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
