Difference between revisions of "TSS:Hg 103993.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=-60 | |distance_to_tss=-60 | ||
|end=14959398 | |end=14959398 | ||
| + | |end_of_center_position=14959380 | ||
|entrez_id=644890 | |entrez_id=644890 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=SPATA39 | + | |gene_alias=SPATA39 |
|gene_description=meiosis/spermiogenesis associated 1 | |gene_description=meiosis/spermiogenesis associated 1 | ||
|gene_id=644890 | |gene_id=644890 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=14959360 | |start=14959360 | ||
| + | |start_of_center_position=14959379 | ||
|strand=+ | |strand=+ | ||
|tata_box="-79(GCGCATAAAAGC,-,0.00)" | |tata_box="-79(GCGCATAAAAGC,-,0.00)" | ||
Revision as of 00:09, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 14959379 |
|---|---|
| End of the center position in the TSS region: | 14959380 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000477770.5 ENST00000407572.5 NM_001080836 uc009xjk.1 uc057ryz.1 |
|---|---|
| Distance: | 41 |
| Num_trans: | 7 |
| All_trans: | ENST00000477770.5:41 ENST00000407572.5:41 NM_001080836:41 uc009xjk.1:41 uc057ryz.1:41 ENST00000496225.2:112 uc057rza.1:112 |
TATA-Box annotation
| Distance to TSS: | -60 |
|---|---|
| Nearest PromoterID: | NM_001080836 |
| Entrez ID: | 644890 |
| Nearest Unigene: | Hs.257249 |
| Nearest Refseq: | NM_001080836 |
| Nearest Ensembl: | ENSG00000197889 |
| Gene Name: | meiosis/spermiogenesis associated 1 |
| Gene Alias: | SPATA39 |
| Gene Description: | meiosis/spermiogenesis associated 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-79(GCGCATAAAAGC,-,0.00)" |
