Difference between revisions of "TSS:Hg 104057.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=708 | |distance_to_tss=708 | ||
|end=17229287 | |end=17229287 | ||
| + | |end_of_center_position=17229278 | ||
|entrez_id=100507347 | |entrez_id=100507347 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=17229267 | |start=17229267 | ||
| + | |start_of_center_position=17229277 | ||
|strand=+ | |strand=+ | ||
|tata_box="-34(GGTTATAAAAAC,-,0.00)" | |tata_box="-34(GGTTATAAAAAC,-,0.00)" | ||
Revision as of 00:25, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17229277 |
|---|---|
| End of the center position in the TSS region: | 17229278 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000224237.9 ENST00000487938.5 uc057sbc.1 uc057sbd.1 AK222507 AK222602 AK056766 AK091813 AK097336 AK098444 EU794672 X16478 AK222482 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | ENST00000224237.9:0 ENST00000487938.5:0 uc057sbc.1:0 uc057sbd.1:0 AK222507:0 AK222602:0 AK056766:0 AK091813:0 AK097336:0 AK098444:0 EU794672:0 X16478:0 AK222482:0 ENST00000485947.1:4 uc057sbe.1:4 AF328728:8 BC030573:12 BC000163:12 Z19554:17 X56134:93 AK290643:111 AB590763:133 CU674070:135 KJ892377:135 CR407690:136 KU178388:136 KU178389:136 ENST00000497849.1:-399 uc057sbb.1:-399 |
TATA-Box annotation
| Distance to TSS: | 708 |
|---|---|
| Nearest PromoterID: | NR_108061 |
| Entrez ID: | 100507347 |
| Nearest Unigene: | Hs.740502 |
| Nearest Refseq: | NR_108060 |
| Nearest Ensembl: | ENSG00000229124 |
| Gene Name: | vimentin |
| Gene Alias: | - |
| Gene Description: | VIM antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(GGTTATAAAAAC,-,0.00)" |
