Difference between revisions of "TSS:Hg 232203.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC031031:207 |chr=chr10 |cpg_percent=0.005 |distance=207 |distance_to_tss=-6388 |end=17236379 |entrez_id=100507347 |gc_percent=0.368159 |gene_alias=- |g...") |
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|distance_to_tss=-6388 | |distance_to_tss=-6388 | ||
|end=17236379 | |end=17236379 | ||
| + | |end_of_center_position=18140844 | ||
|entrez_id=100507347 | |entrez_id=100507347 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=17236367 | |start=17236367 | ||
| + | |start_of_center_position=18140843 | ||
|strand=+ | |strand=+ | ||
|tata_box="14(TCTTTTAAGGAA,+,0.00)" | |tata_box="14(TCTTTTAAGGAA,+,0.00)" | ||
Revision as of 00:40, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 18140843 |
|---|---|
| End of the center position in the TSS region: | 18140844 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC031031 |
|---|---|
| Distance: | 207 |
| Num_trans: | 1 |
| All_trans: | BC031031:207 |
TATA-Box annotation
| Distance to TSS: | -6388 |
|---|---|
| Nearest PromoterID: | NR_108061 |
| Entrez ID: | 100507347 |
| Nearest Unigene: | Hs.740502 |
| Nearest Refseq: | NR_108060 |
| Nearest Ensembl: | ENSG00000229124 |
| Gene Name: | vimentin |
| Gene Alias: | - |
| Gene Description: | VIM antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "14(TCTTTTAAGGAA,+,0.00)" |
