Personal tools

Difference between revisions of "TSS:Hg 104171.1"

From referenceTSS

Jump to: navigation, search
Line 6: Line 6:
 
|distance_to_tss=185
 
|distance_to_tss=185
 
|end=19816631
 
|end=19816631
 +
|end_of_center_position=19816628
 
|entrez_id=84898
 
|entrez_id=84898
 
|gc_percent=0.572139
 
|gc_percent=0.572139
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=19816624
 
|start=19816624
 +
|start_of_center_position=19816627
 
|strand=+
 
|strand=+
 
|transcript_name=NM_001282736 NM_032812 AY358486
 
|transcript_name=NM_001282736 NM_032812 AY358486

Revision as of 00:47, 12 May 2019

Basic information about the TSS


TSS ID:hg_104171.1
Species:human
Chr:chr10
TSS Classification:yes
Start:19816624
End:19816631
Strand:+
TSS Score:1
Start of the center position in the TSS region:19816627
End of the center position in the TSS region:19816628



Gene and protein annotation


Transcript_name:NM_001282736 NM_032812 AY358486
Distance:-182
GeneID:84898
HGNC/MGI_ID:HGNC:21013
UniProt_ID:Q6UX71
Gene_name:plexin domain containing 2
Gene_symbol:PLXDC2
Gene_synonyms:FLJ14623 TEM7R
Gene_source:HGNC:21013



Transcript annotation


Transcript_name:NM_001282736 NM_032812 AY358486
Distance:-182
Num_trans:12
All_trans:NM_001282736:-182 NM_032812:-182 AY358486:-182 AK304591:-188 BC012885:206 ENST00000377242.7:-386 ENST00000377252.4:-386 uc001iqh.3:-386 uc001iqg.3:-386 AF378757:440 CU680430:446 KJ903482:446



TATA-Box annotation


Distance to TSS:185
Nearest PromoterID:NM_032812
Entrez ID:84898
Nearest Unigene:Hs.99472
Nearest Refseq:NM_032812
Nearest Ensembl:ENSG00000120594
Gene Name:plexin domain containing 2
Gene Alias:TEM7R
Gene Description:plexin domain containing 2
Gene Type:protein-coding
CpG%:0.05
GC%:0.572139
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):