Difference between revisions of "TSS:Hg 104186.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=326856 | |distance_to_tss=326856 | ||
|end=20143305 | |end=20143305 | ||
| + | |end_of_center_position=20143299 | ||
|entrez_id=84898 | |entrez_id=84898 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=20143292 | |start=20143292 | ||
| + | |start_of_center_position=20143298 | ||
|strand=+ | |strand=+ | ||
|tata_box="-55(TTTTATATGGGC,+,0.00),53(CACCTTTAATGG,-,0.00),55(CCTTTAATGGCA,+,0.00)" | |tata_box="-55(TTTTATATGGGC,+,0.00),53(CACCTTTAATGG,-,0.00),55(CCTTTAATGGCA,+,0.00)" | ||
Revision as of 00:48, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 20143298 |
|---|---|
| End of the center position in the TSS region: | 20143299 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK027529 |
|---|---|
| Distance: | 99 |
| Num_trans: | 1 |
| All_trans: | AK027529:99 |
TATA-Box annotation
| Distance to TSS: | 326856 |
|---|---|
| Nearest PromoterID: | NM_032812 |
| Entrez ID: | 84898 |
| Nearest Unigene: | Hs.99472 |
| Nearest Refseq: | NM_032812 |
| Nearest Ensembl: | ENSG00000120594 |
| Gene Name: | plexin domain containing 2 |
| Gene Alias: | TEM7R |
| Gene Description: | plexin domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-55(TTTTATATGGGC,+,0.00),53(CACCTTTAATGG,-,0.00),55(CCTTTAATGGCA,+,0.00)" |
