Difference between revisions of "TSS:Hg 232208.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CAVB2= | ||
| + | |MYSB= | ||
|all_trans=NM_201570:33 AK299873:131 AK295113:136 ENST00000377315.4:262 uc001iqa.3:262 AK293937:472 AF423192:481 | |all_trans=NM_201570:33 AK299873:131 AK295113:136 ENST00000377315.4:262 uc001iqa.3:262 AK293937:472 AF423192:481 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-33 | |distance_to_tss=-33 | ||
|end=18400551 | |end=18400551 | ||
| + | |end_of_center_position=21125190 | ||
|entrez_id=783 | |entrez_id=783 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=CACNLB2 | + | |gene_alias=CACNLB2 |
|gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | |gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | ||
|gene_id=783 | |gene_id=783 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=18400550 | |start=18400550 | ||
| + | |start_of_center_position=21125189 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_201570 | |transcript_name=NM_201570 | ||
Revision as of 00:51, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 21125189 |
|---|---|
| End of the center position in the TSS region: | 21125190 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_201570 |
|---|---|
| Distance: | 33 |
| Num_trans: | 7 |
| All_trans: | NM_201570:33 AK299873:131 AK295113:136 ENST00000377315.4:262 uc001iqa.3:262 AK293937:472 AF423192:481 |
TATA-Box annotation
| Distance to TSS: | -33 |
|---|---|
| Nearest PromoterID: | NM_201570 |
| Entrez ID: | 783 |
| Nearest Unigene: | Hs.59093 |
| Nearest Refseq: | NM_000724 |
| Nearest Ensembl: | ENSG00000165995 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Alias: | CACNLB2 |
| Gene Description: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
