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Difference between revisions of "TSS:Hg 108799.1"

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Line 6: Line 6:
 
|distance_to_tss=-10
 
|distance_to_tss=-10
 
|end=27999081
 
|end=27999081
 +
|end_of_center_position=27999061
 
|entrez_id=55130
 
|entrez_id=55130
 
|gc_percent=0.676617
 
|gc_percent=0.676617
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=27999039
 
|start=27999039
 +
|start_of_center_position=27999060
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000305242.9 NM_018076 uc001itz.3 BC085611 AK001679
 
|transcript_name=ENST00000305242.9 NM_018076 uc001itz.3 BC085611 AK001679

Revision as of 01:35, 12 May 2019

Basic information about the TSS


TSS ID:hg_108799.1
Species:human
Chr:chr10
TSS Classification:yes
Start:27999039
End:27999081
Strand:-
TSS Score:1
Start of the center position in the TSS region:27999060
End of the center position in the TSS region:27999061



Gene and protein annotation


Transcript_name:ENST00000305242.9 NM_018076 uc001itz.3 BC085611 AK001679
Distance:0
GeneID:55130
HGNC/MGI_ID:HGNC:25583
UniProt_ID:Q5T2S8
Gene_name:armadillo repeat containing 4
Gene_symbol:ARMC4
Gene_synonyms:CILD23 DKFZP434P1735 FLJ10376 FLJ10817
Gene_source:HGNC:25583



Transcript annotation


Transcript_name:ENST00000305242.9 NM_018076 uc001itz.3 BC085611 AK001679
Distance:0
Num_trans:7
All_trans:ENST00000305242.9:0 NM_018076:0 uc001itz.3:0 BC085611:0 AK001679:0 NM_001290020:134 AK292521:178



TATA-Box annotation


Distance to TSS:-10
Nearest PromoterID:NM_018076
Entrez ID:55130
Nearest Unigene:Hs.127530
Nearest Refseq:NM_018076
Nearest Ensembl:ENSG00000169126
Gene Name:armadillo repeat containing 4
Gene Alias:CILD23
Gene Description:armadillo repeat containing 4
Gene Type:protein-coding
CpG%:0.115
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):