Difference between revisions of "TSS:Hg 220025.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AB527866:-4 CR542284:-4 HQ258255:-4 KJ890954:-4 ENST00000375321.1:-121 uc001ivj.2:-121 Z14138:-121 ENST00000430603.1:234 uc057sno.1:234 |chr=chr10 |cpg_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |COT= | ||
| + | |EST= | ||
| + | |ESTF= | ||
| + | |MEKK8= | ||
| + | |TPL2= | ||
| + | |Tpl-2= | ||
|all_trans=AB527866:-4 CR542284:-4 HQ258255:-4 KJ890954:-4 ENST00000375321.1:-121 uc001ivj.2:-121 Z14138:-121 ENST00000430603.1:234 uc057sno.1:234 | |all_trans=AB527866:-4 CR542284:-4 HQ258255:-4 KJ890954:-4 ENST00000375321.1:-121 uc001ivj.2:-121 Z14138:-121 ENST00000430603.1:234 uc057sno.1:234 | ||
| + | |c-COT= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=4308 | |distance_to_tss=4308 | ||
|end=30438943 | |end=30438943 | ||
| + | |end_of_center_position=30438943 | ||
|entrez_id=1326 | |entrez_id=1326 | ||
|gc_percent=0.313433 | |gc_percent=0.313433 | ||
| − | |gene_alias=AURA2 | + | |gene_alias=AURA2 |
|gene_description=mitogen-activated protein kinase kinase kinase 8 | |gene_description=mitogen-activated protein kinase kinase kinase 8 | ||
|gene_id=1326 | |gene_id=1326 | ||
| Line 24: | Line 32: | ||
|species=human | |species=human | ||
|start=30438942 | |start=30438942 | ||
| + | |start_of_center_position=30438942 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AB527866 CR542284 HQ258255 KJ890954 | |transcript_name=AB527866 CR542284 HQ258255 KJ890954 | ||
Revision as of 01:52, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 30438942 |
|---|---|
| End of the center position in the TSS region: | 30438943 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB527866 CR542284 HQ258255 KJ890954 |
|---|---|
| Distance: | -4 |
| Num_trans: | 9 |
| All_trans: | AB527866:-4 CR542284:-4 HQ258255:-4 KJ890954:-4 ENST00000375321.1:-121 uc001ivj.2:-121 Z14138:-121 ENST00000430603.1:234 uc057sno.1:234 |
TATA-Box annotation
| Distance to TSS: | 4308 |
|---|---|
| Nearest PromoterID: | NM_001320961 |
| Entrez ID: | 1326 |
| Nearest Unigene: | Hs.432453 |
| Nearest Refseq: | NM_005204 |
| Nearest Ensembl: | ENSG00000107968 |
| Gene Name: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Alias: | AURA2 |
| Gene Description: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.313433 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
