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Difference between revisions of "TSS:Hg 104628.1"

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Line 10: Line 10:
 
|distance_to_tss=138
 
|distance_to_tss=138
 
|end=32446244
 
|end=32446244
 +
|end_of_center_position=32446220
 
|entrez_id=79741
 
|entrez_id=79741
 
|gc_percent=0.636816
 
|gc_percent=0.636816
|gene_alias=BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68
+
|gene_alias=BIOT2
 
|gene_description=coiled-coil domain containing 7
 
|gene_description=coiled-coil domain containing 7
 
|gene_id=79741
 
|gene_id=79741
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=32446195
 
|start=32446195
 +
|start_of_center_position=32446219
 
|strand=+
 
|strand=+
 
|transcript_name=BC022020
 
|transcript_name=BC022020

Revision as of 02:10, 12 May 2019

Basic information about the TSS


TSS ID:hg_104628.1
Species:human
Chr:chr10
TSS Classification:yes
Start:32446195
End:32446244
Strand:+
TSS Score:1
Start of the center position in the TSS region:32446219
End of the center position in the TSS region:32446220



Gene and protein annotation


Transcript_name:BC022020
Distance:-20
GeneID:79741
HGNC/MGI_ID:HGNC:26533
UniProt_ID:
Gene_name:coiled-coil domain containing 7
Gene_symbol:CCDC7
Gene_synonyms:BIOT2 FLJ13031 FLJ32762
Gene_source:HGNC:26533



Transcript annotation


Transcript_name:BC022020
Distance:-20
Num_trans:16
All_trans:BC022020:-20 BC042672:-39 ENST00000476558.5:-56 ENST00000277657.10:-56 ENST00000362006.9:-56 uc057spu.1:-56 uc001iwk.5:-56 uc001iwj.5:-56 AK057324:-56 NR_109827:-114 NR_109826:-114 NM_145023:-114 NM_001026383:-114 ENST00000545067.5:143 uc057spv.1:143 BX647771:143



TATA-Box annotation


Distance to TSS:138
Nearest PromoterID:NR_109826
Entrez ID:79741
Nearest Unigene:Hs.585464
Nearest Refseq:NM_024688
Nearest Ensembl:ENSG00000150076
Gene Name:coiled-coil domain containing 7
Gene Alias:BIOT2
Gene Description:coiled-coil domain containing 7
Gene Type:protein-coding
CpG%:0.09
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):