Difference between revisions of "TSS:Hg 224308.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000490511.1:-175 uc001iyq.4:-175 ENST00000469517.1:208 uc057ste.1:208 ENST00000344351.5:-267 uc001iyt.4:-267 ENST00000468236.5:-275 uc031pud.2:-27...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
|all_trans=ENST00000490511.1:-175 uc001iyq.4:-175 ENST00000469517.1:208 uc057ste.1:208 ENST00000344351.5:-267 uc001iyt.4:-267 ENST00000468236.5:-275 uc031pud.2:-275 AK291566:-280 ENST00000474931.5:-282 NM_001267570:-282 NM_182724:-282 NM_182723:-282 NM_182721:-282 NR_051972:-282 NR_051971:-282 uc001iyr.4:-282 AK289379:-282 ENST00000488741.5:-319 uc001iyp.4:-319 | |all_trans=ENST00000490511.1:-175 uc001iyq.4:-175 ENST00000469517.1:208 uc057ste.1:208 ENST00000344351.5:-267 uc001iyt.4:-267 ENST00000468236.5:-275 uc031pud.2:-275 AK291566:-280 ENST00000474931.5:-282 NM_001267570:-282 NM_182724:-282 NM_182723:-282 NM_182721:-282 NR_051972:-282 NR_051971:-282 uc001iyr.4:-282 AK289379:-282 ENST00000488741.5:-319 uc001iyp.4:-319 | ||
|chr=chr10 | |chr=chr10 | ||
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|distance_to_tss=285 | |distance_to_tss=285 | ||
|end=35196191 | |end=35196191 | ||
| + | |end_of_center_position=35196188 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=CREM | + | |gene_alias=CREM-2 |
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
|gene_id=1390 | |gene_id=1390 | ||
| Line 16: | Line 18: | ||
|gene_synonyms=hCREM-2 | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
|hgnc_mgi_id=HGNC:2352 | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=35196183 | |start=35196183 | ||
| + | |start_of_center_position=35196187 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000490511.1 uc001iyq.4 | |transcript_name=ENST00000490511.1 uc001iyq.4 | ||
Revision as of 02:25, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 35196187 |
|---|---|
| End of the center position in the TSS region: | 35196188 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000490511.1 uc001iyq.4 |
|---|---|
| Distance: | -175 |
| Num_trans: | 20 |
| All_trans: | ENST00000490511.1:-175 uc001iyq.4:-175 ENST00000469517.1:208 uc057ste.1:208 ENST00000344351.5:-267 uc001iyt.4:-267 ENST00000468236.5:-275 uc031pud.2:-275 AK291566:-280 ENST00000474931.5:-282 NM_001267570:-282 NM_182724:-282 NM_182723:-282 NM_182721:-282 NR_051972:-282 NR_051971:-282 uc001iyr.4:-282 AK289379:-282 ENST00000488741.5:-319 uc001iyp.4:-319 |
TATA-Box annotation
| Distance to TSS: | 285 |
|---|---|
| Nearest PromoterID: | NR_051972 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
