Difference between revisions of "TSS:Hg 232261.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
|all_trans=ENST00000489321.5:46 uc057ssp.1:46 ENST00000427847.6:79 ENST00000374728.7:79 NM_183060:79 NM_181571:79 uc057ssq.1:79 uc001iyc.4:79 ENST00000345491.7:82 uc001iyb.4:82 BC041810:82 ENST00000487132.5:99 uc057ssr.1:99 ENST00000354759.7:-216 uc001iya.4:-216 D14825:-216 ENST00000496019.5:-222 uc057sso.1:-222 ENST00000460270.5:-261 uc001ixz.4:-261 ENST00000469949.6:-276 uc057ssn.1:-276 ENST00000429130.7:-287 uc057ssm.1:-287 ENST00000495960.5:-315 uc057ssl.1:-315 ENST00000482633.5:-330 uc057ssk.1:-330 ENST00000466251.5:-389 uc057ssj.1:-389 BC017117:-401 ENST00000490460.5:-419 uc057ssi.1:-419 ENST00000461968.5:-430 uc057ssh.1:-430 ENST00000374726.7:-455 uc001ixx.4:-455 BC066342:-455 ENST00000489388.5:-472 uc057ssg.1:-472 | |all_trans=ENST00000489321.5:46 uc057ssp.1:46 ENST00000427847.6:79 ENST00000374728.7:79 NM_183060:79 NM_181571:79 uc057ssq.1:79 uc001iyc.4:79 ENST00000345491.7:82 uc001iyb.4:82 BC041810:82 ENST00000487132.5:99 uc057ssr.1:99 ENST00000354759.7:-216 uc001iya.4:-216 D14825:-216 ENST00000496019.5:-222 uc057sso.1:-222 ENST00000460270.5:-261 uc001ixz.4:-261 ENST00000469949.6:-276 uc057ssn.1:-276 ENST00000429130.7:-287 uc057ssm.1:-287 ENST00000495960.5:-315 uc057ssl.1:-315 ENST00000482633.5:-330 uc057ssk.1:-330 ENST00000466251.5:-389 uc057ssj.1:-389 BC017117:-401 ENST00000490460.5:-419 uc057ssi.1:-419 ENST00000461968.5:-430 uc057ssh.1:-430 ENST00000374726.7:-455 uc001ixx.4:-455 BC066342:-455 ENST00000489388.5:-472 uc057ssg.1:-472 | ||
|chr=chr10 | |chr=chr10 | ||
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|distance_to_tss=-79 | |distance_to_tss=-79 | ||
|end=35127378 | |end=35127378 | ||
| + | |end_of_center_position=35804469 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=CREM | + | |gene_alias=CREM-2 |
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
|gene_id=1390 | |gene_id=1390 | ||
| Line 16: | Line 18: | ||
|gene_synonyms=hCREM-2 | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
|hgnc_mgi_id=HGNC:2352 | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=35127377 | |start=35127377 | ||
| + | |start_of_center_position=35804468 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000489321.5 uc057ssp.1 | |transcript_name=ENST00000489321.5 uc057ssp.1 | ||
Revision as of 02:29, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 35804468 |
|---|---|
| End of the center position in the TSS region: | 35804469 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000489321.5 uc057ssp.1 |
|---|---|
| Distance: | 46 |
| Num_trans: | 40 |
| All_trans: | ENST00000489321.5:46 uc057ssp.1:46 ENST00000427847.6:79 ENST00000374728.7:79 NM_183060:79 NM_181571:79 uc057ssq.1:79 uc001iyc.4:79 ENST00000345491.7:82 uc001iyb.4:82 BC041810:82 ENST00000487132.5:99 uc057ssr.1:99 ENST00000354759.7:-216 uc001iya.4:-216 D14825:-216 ENST00000496019.5:-222 uc057sso.1:-222 ENST00000460270.5:-261 uc001ixz.4:-261 ENST00000469949.6:-276 uc057ssn.1:-276 ENST00000429130.7:-287 uc057ssm.1:-287 ENST00000495960.5:-315 uc057ssl.1:-315 ENST00000482633.5:-330 uc057ssk.1:-330 ENST00000466251.5:-389 uc057ssj.1:-389 BC017117:-401 ENST00000490460.5:-419 uc057ssi.1:-419 ENST00000461968.5:-430 uc057ssh.1:-430 ENST00000374726.7:-455 uc001ixx.4:-455 BC066342:-455 ENST00000489388.5:-472 uc057ssg.1:-472 |
TATA-Box annotation
| Distance to TSS: | -79 |
|---|---|
| Nearest PromoterID: | NM_183060 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
