Difference between revisions of "TSS:Hg 104794.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=61 | |distance_to_tss=61 | ||
|end=45727290 | |end=45727290 | ||
| + | |end_of_center_position=45727262 | ||
|entrez_id=253725 | |entrez_id=253725 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=FAM21A | + | |gene_alias=FAM21A |
|gene_description=WASH complex subunit 2C | |gene_description=WASH complex subunit 2C | ||
|gene_id=253725 | |gene_id=253725 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=45727232 | |start=45727232 | ||
| + | |start_of_center_position=45727261 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000336378.8 ENST00000623400.3 ENST00000420848.3 uc057szf.1 uc057szg.1 uc057szh.1 AK303048 AK293929 BC053887 | |transcript_name=ENST00000336378.8 ENST00000623400.3 ENST00000420848.3 uc057szf.1 uc057szg.1 uc057szh.1 AK303048 AK293929 BC053887 | ||
Revision as of 02:54, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45727261 |
|---|---|
| End of the center position in the TSS region: | 45727262 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000336378.8 ENST00000623400.3 ENST00000420848.3 uc057szf.1 uc057szg.1 uc057szh.1 AK303048 AK293929 BC053887 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000336378.8:0 ENST00000623400.3:0 ENST00000420848.3:0 uc057szf.1:0 uc057szg.1:0 uc057szh.1:0 AK303048:0 AK293929:0 BC053887:0 ENST00000374362.6:-14 uc001jcu.4:-14 AB011164:-14 AK291430:-21 ENST00000540872.5:-33 ENST00000537517.5:-33 ENST00000359860.7:-33 NM_001169107:-33 NM_001169106:-33 NM_015262:-33 uc057sze.1:-33 uc010qfi.3:-33 uc010qfk.3:-33 AB383916:126 |
TATA-Box annotation
| Distance to TSS: | 61 |
|---|---|
| Nearest PromoterID: | NM_001169107 |
| Entrez ID: | 253725 |
| Nearest Unigene: | Hs.365286 |
| Nearest Refseq: | NM_015262 |
| Nearest Ensembl: | ENSG00000172661 |
| Gene Name: | family with sequence similarity 21 member C |
| Gene Alias: | FAM21A |
| Gene Description: | WASH complex subunit 2C |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
