Difference between revisions of "TSS:Hg 232302.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr10 |cpg_percent=0.015 |distance= |distance_to_tss=62748 |end=48112397 |entrez_id=143162 |gc_percent=0.328358 |gene_alias=PDZD5C|PDZK4|PDZK5C |gene_descript...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PDZK4= | ||
| + | |PDZK5C= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 5: | Line 7: | ||
|distance_to_tss=62748 | |distance_to_tss=62748 | ||
|end=48112397 | |end=48112397 | ||
| + | |end_of_center_position=49133901 | ||
|entrez_id=143162 | |entrez_id=143162 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
| − | |gene_alias=PDZD5C | + | |gene_alias=PDZD5C |
|gene_description=FERM and PDZ domain containing 2 | |gene_description=FERM and PDZ domain containing 2 | ||
|gene_name=FRMPD2 | |gene_name=FRMPD2 | ||
| Line 18: | Line 21: | ||
|species=human | |species=human | ||
|start=48112393 | |start=48112393 | ||
| + | |start_of_center_position=49133900 | ||
|strand=+ | |strand=+ | ||
|tata_box="75(CATTTTTAAAGG,-,0.00)" | |tata_box="75(CATTTTTAAAGG,-,0.00)" | ||
Revision as of 03:12, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 49133900 |
|---|---|
| End of the center position in the TSS region: | 49133901 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 62748 |
|---|---|
| Nearest PromoterID: | NM_001042512 |
| Entrez ID: | 143162 |
| Nearest Unigene: | Hs.664786 |
| Nearest Refseq: | NM_152428 |
| Nearest Ensembl: | ENSG00000170324 |
| Gene Name: | FRMPD2 |
| Gene Alias: | PDZD5C |
| Gene Description: | FERM and PDZ domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "75(CATTTTTAAAGG,-,0.00)" |
