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Difference between revisions of "TSS:Hg 104895.1"

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Line 7: Line 7:
 
|distance_to_tss=42
 
|distance_to_tss=42
 
|end=49610354
 
|end=49610354
 +
|end_of_center_position=49610343
 
|entrez_id=6572
 
|entrez_id=6572
 
|gc_percent=0.746269
 
|gc_percent=0.746269
|gene_alias=CMS21|VACHT
+
|gene_alias=CMS21
 
|gene_description=solute carrier family 18 member A3
 
|gene_description=solute carrier family 18 member A3
 
|gene_id=6572
 
|gene_id=6572
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=49610331
 
|start=49610331
 +
|start_of_center_position=49610342
 
|strand=+
 
|strand=+
 
|transcript_name=BC007765
 
|transcript_name=BC007765

Revision as of 03:16, 12 May 2019

Basic information about the TSS


TSS ID:hg_104895.1
Species:human
Chr:chr10
TSS Classification:yes
Start:49610331
End:49610354
Strand:+
TSS Score:1
Start of the center position in the TSS region:49610342
End of the center position in the TSS region:49610343



Gene and protein annotation


Transcript_name:BC007765
Distance:21
GeneID:6572
HGNC/MGI_ID:HGNC:10936
UniProt_ID:
Gene_name:solute carrier family 18 member A3
Gene_symbol:SLC18A3
Gene_synonyms:VACHT
Gene_source:HGNC:10936



Transcript annotation


Transcript_name:BC007765
Distance:21
Num_trans:9
All_trans:BC007765:21 ENST00000374115.4:-31 NM_003055:-31 uc001jhw.3:-31 U09210:-31 AK313094:58 CU675799:384 JF432245:384 KJ897576:384



TATA-Box annotation


Distance to TSS:42
Nearest PromoterID:NM_003055
Entrez ID:6572
Nearest Unigene:Hs.654374
Nearest Refseq:NM_003055
Nearest Ensembl:ENSG00000187714
Gene Name:solute carrier family 18 member A3
Gene Alias:CMS21
Gene Description:solute carrier family 18 member A3
Gene Type:protein-coding
CpG%:0.135
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):