Difference between revisions of "TSS:Hg 232308.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000561967.1:73 uc057rdc.1:73 ENST00000568866.5:89 uc057rdb.1:89 ENST00000562809.1:97 ENST00000563456.1:97 uc057rdd.1:97 uc057rdf.1:97 BC156319:126...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OOMD2= | ||
|all_trans=ENST00000561967.1:73 uc057rdc.1:73 ENST00000568866.5:89 uc057rdb.1:89 ENST00000562809.1:97 ENST00000563456.1:97 uc057rdd.1:97 uc057rdf.1:97 BC156319:126 BC157066:126 NM_177987:128 BC101271:135 BC101270:135 ENST00000567466.1:-155 uc057rde.1:-155 ENST00000568584.5:-223 uc001ifi.3:-223 | |all_trans=ENST00000561967.1:73 uc057rdc.1:73 ENST00000568866.5:89 uc057rdb.1:89 ENST00000562809.1:97 ENST00000563456.1:97 uc057rdd.1:97 uc057rdf.1:97 BC156319:126 BC157066:126 NM_177987:128 BC101271:135 BC101270:135 ENST00000567466.1:-155 uc057rde.1:-155 ENST00000568584.5:-223 uc001ifi.3:-223 | ||
| + | |bA631M21.2= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-128 | |distance_to_tss=-128 | ||
|end=49366 | |end=49366 | ||
| + | |end_of_center_position=49613098 | ||
|entrez_id=347688 | |entrez_id=347688 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=OOMD | + | |gene_alias=OOMD |
|gene_description=tubulin beta 8 class VIII | |gene_description=tubulin beta 8 class VIII | ||
|gene_id=347688 | |gene_id=347688 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=49365 | |start=49365 | ||
| + | |start_of_center_position=49613097 | ||
|strand=- | |strand=- | ||
|tata_box="35(GGCTATTTAAAC,-,0.00)" | |tata_box="35(GGCTATTTAAAC,-,0.00)" | ||
Revision as of 03:16, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 49613097 |
|---|---|
| End of the center position in the TSS region: | 49613098 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000561967.1 uc057rdc.1 |
|---|---|
| Distance: | 73 |
| Num_trans: | 17 |
| All_trans: | ENST00000561967.1:73 uc057rdc.1:73 ENST00000568866.5:89 uc057rdb.1:89 ENST00000562809.1:97 ENST00000563456.1:97 uc057rdd.1:97 uc057rdf.1:97 BC156319:126 BC157066:126 NM_177987:128 BC101271:135 BC101270:135 ENST00000567466.1:-155 uc057rde.1:-155 ENST00000568584.5:-223 uc001ifi.3:-223 |
TATA-Box annotation
| Distance to TSS: | -128 |
|---|---|
| Nearest PromoterID: | NM_177987 |
| Entrez ID: | 347688 |
| Nearest Unigene: | Hs.532659 |
| Nearest Refseq: | NM_177987 |
| Nearest Ensembl: | ENSG00000261456 |
| Gene Name: | tubulin beta 8 class VIII |
| Gene Alias: | OOMD |
| Gene Description: | tubulin beta 8 class VIII |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "35(GGCTATTTAAAC,-,0.00)" |
