Difference between revisions of "TSS:Hg 104972.1"
From referenceTSS
| Line 12: | Line 12: | ||
|distance_to_tss=-248919 | |distance_to_tss=-248919 | ||
|end=53020624 | |end=53020624 | ||
| + | |end_of_center_position=53020620 | ||
|entrez_id=4153 | |entrez_id=4153 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=COLEC1 | + | |gene_alias=COLEC1 |
|gene_description=mannose binding lectin 2 | |gene_description=mannose binding lectin 2 | ||
|gene_name=MBL2 | |gene_name=MBL2 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=53020614 | |start=53020614 | ||
| + | |start_of_center_position=53020619 | ||
|strand=+ | |strand=+ | ||
|tata_box="-88(GGCCTTTAAGAG,-,0.00),-87(GCCTTTAAGAGG,-,0.00),-86(CCTTTAAGAGGT,+,0.00),-34(CCTTATAAAAGG,+,0.00),-34(CCTTATAAAAGG,-,0.00)" | |tata_box="-88(GGCCTTTAAGAG,-,0.00),-87(GCCTTTAAGAGG,-,0.00),-86(CCTTTAAGAGGT,+,0.00),-34(CCTTATAAAAGG,+,0.00),-34(CCTTATAAAAGG,-,0.00)" | ||
Revision as of 03:29, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 53020619 |
|---|---|
| End of the center position in the TSS region: | 53020620 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -248919 |
|---|---|
| Nearest PromoterID: | NM_000242 |
| Entrez ID: | 4153 |
| Nearest Unigene: | Hs.499674 |
| Nearest Refseq: | NM_000242 |
| Nearest Ensembl: | ENSG00000165471 |
| Gene Name: | MBL2 |
| Gene Alias: | COLEC1 |
| Gene Description: | mannose binding lectin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-88(GGCCTTTAAGAG,-,0.00),-87(GCCTTTAAGAGG,-,0.00),-86(CCTTTAAGAGGT,+,0.00),-34(CCTTATAAAAGG,+,0.00),-34(CCTTATAAAAGG,-,0.00)" |
