Personal tools

Difference between revisions of "TSS:Hg 104993.1"

From referenceTSS

Jump to: navigation, search
Line 10: Line 10:
 
|distance_to_tss=27
 
|distance_to_tss=27
 
|end=58335014
 
|end=58335014
 +
|end_of_center_position=58335007
 
|entrez_id=7321
 
|entrez_id=7321
 
|gc_percent=0.741294
 
|gc_percent=0.741294
|gene_alias=E2(17)KB1|SFT|UBC4/5|UBCH5|UBCH5A
+
|gene_alias=E2(17)KB1
 
|gene_description=ubiquitin conjugating enzyme E2 D1
 
|gene_description=ubiquitin conjugating enzyme E2 D1
 
|gene_id=7321
 
|gene_id=7321
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=58334998
 
|start=58334998
 +
|start_of_center_position=58335006
 
|strand=+
 
|strand=+
 
|transcript_name=AK291901 BC005980 BC015997
 
|transcript_name=AK291901 BC005980 BC015997

Revision as of 03:34, 12 May 2019

Basic information about the TSS


TSS ID:hg_104993.1
Species:human
Chr:chr10
TSS Classification:yes
Start:58334998
End:58335014
Strand:+
TSS Score:1
Start of the center position in the TSS region:58335006
End of the center position in the TSS region:58335007



Gene and protein annotation


Transcript_name:AK291901 BC005980 BC015997
Distance:0
GeneID:7321
HGNC/MGI_ID:HGNC:12474
UniProt_ID:
Gene_name:ubiquitin conjugating enzyme E2 D1
Gene_symbol:UBE2D1
Gene_synonyms:E2(17)KB1 UBC4/5 UBCH5 UbcH5A
Gene_source:HGNC:12474



Transcript annotation


Transcript_name:AK291901 BC005980 BC015997
Distance:0
Num_trans:17
All_trans:AK291901:0 BC005980:0 BC015997:0 ENST00000615793.1:-20 NM_001204880:-20 NM_003338:-20 uc021prc.2:-20 ENST00000373910.8:-24 uc001jke.3:-24 AJ272367:42 AF257220:42 X78140:173 AB590170:186 DQ896385:186 DQ893111:186 KJ892341:187 BT007041:188



TATA-Box annotation


Distance to TSS:27
Nearest PromoterID:NM_001204880
Entrez ID:7321
Nearest Unigene:Hs.129683
Nearest Refseq:NM_003338
Nearest Ensembl:ENSG00000072401
Gene Name:ubiquitin conjugating enzyme E2 D1
Gene Alias:E2(17)KB1
Gene Description:ubiquitin conjugating enzyme E2 D1
Gene Type:protein-coding
CpG%:0.14
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):