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Difference between revisions of "TSS:Hg 105059.1"

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Line 8: Line 8:
 
|distance_to_tss=438
 
|distance_to_tss=438
 
|end=61901706
 
|end=61901706
 +
|end_of_center_position=61901693
 
|entrez_id=84159
 
|entrez_id=84159
 
|gc_percent=0.562189
 
|gc_percent=0.562189
|gene_alias=DESRT|MRF-2|MRF2
+
|gene_alias=DESRT
 
|gene_description=AT-rich interaction domain 5B
 
|gene_description=AT-rich interaction domain 5B
 
|gene_id=84159
 
|gene_id=84159
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=61901678
 
|start=61901678
 +
|start_of_center_position=61901692
 
|strand=+
 
|strand=+
 
|transcript_name=AK296921 BC107800 BC056680
 
|transcript_name=AK296921 BC107800 BC056680

Revision as of 03:57, 12 May 2019

Basic information about the TSS


TSS ID:hg_105059.1
Species:human
Chr:chr10
TSS Classification:no
Start:61901678
End:61901706
Strand:+
TSS Score:1
Start of the center position in the TSS region:61901692
End of the center position in the TSS region:61901693



Gene and protein annotation


Transcript_name:AK296921 BC107800 BC056680
Distance:0
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:AK296921 BC107800 BC056680
Distance:0
Num_trans:9
All_trans:AK296921:0 BC107800:0 BC056680:0 AB527389:4 BC156570:4 BC152736:4 ENST00000279873.11:-379 uc001jlt.3:-379 NM_032199:-425



TATA-Box annotation


Distance to TSS:438
Nearest PromoterID:NM_032199
Entrez ID:84159
Nearest Unigene:Hs.535297
Nearest Refseq:NM_032199
Nearest Ensembl:ENSG00000150347
Gene Name:AT-rich interaction domain 5B
Gene Alias:DESRT
Gene Description:AT-rich interaction domain 5B
Gene Type:protein-coding
CpG%:0.05
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):