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Difference between revisions of "TSS:Hg 105089.1"

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Line 8: Line 8:
 
|distance_to_tss=113
 
|distance_to_tss=113
 
|end=62049330
 
|end=62049330
 +
|end_of_center_position=62049325
 
|entrez_id=84159
 
|entrez_id=84159
 
|gc_percent=0.587065
 
|gc_percent=0.587065
|gene_alias=DESRT|MRF-2|MRF2
+
|gene_alias=DESRT
 
|gene_description=AT-rich interaction domain 5B
 
|gene_description=AT-rich interaction domain 5B
 
|gene_id=84159
 
|gene_id=84159
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=62049318
 
|start=62049318
 +
|start_of_center_position=62049324
 
|strand=+
 
|strand=+
 
|transcript_name=BC066345
 
|transcript_name=BC066345

Revision as of 04:00, 12 May 2019

Basic information about the TSS


TSS ID:hg_105089.1
Species:human
Chr:chr10
TSS Classification:yes
Start:62049318
End:62049330
Strand:+
TSS Score:1
Start of the center position in the TSS region:62049324
End of the center position in the TSS region:62049325



Gene and protein annotation


Transcript_name:BC066345
Distance:-76
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:BC066345
Distance:-76
Num_trans:6
All_trans:BC066345:-76 ENST00000309334.5:-108 NM_001244638:-108 uc001jlu.3:-108 BC015120:-108 AK024803:136



TATA-Box annotation


Distance to TSS:113
Nearest PromoterID:NM_001244638
Entrez ID:84159
Nearest Unigene:Hs.535297
Nearest Refseq:NM_032199
Nearest Ensembl:ENSG00000150347
Gene Name:AT-rich interaction domain 5B
Gene Alias:DESRT
Gene Description:AT-rich interaction domain 5B
Gene Type:protein-coding
CpG%:0.04
GC%:0.587065
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):