Personal tools

Difference between revisions of "TSS:Hg 105093.1"

From referenceTSS

Jump to: navigation, search
Line 8: Line 8:
 
|distance_to_tss=240
 
|distance_to_tss=240
 
|end=62049452
 
|end=62049452
 +
|end_of_center_position=62049451
 
|entrez_id=84159
 
|entrez_id=84159
 
|gc_percent=0.497512
 
|gc_percent=0.497512
|gene_alias=DESRT|MRF-2|MRF2
+
|gene_alias=DESRT
 
|gene_description=AT-rich interaction domain 5B
 
|gene_description=AT-rich interaction domain 5B
 
|gene_id=84159
 
|gene_id=84159
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=62049449
 
|start=62049449
 +
|start_of_center_position=62049450
 
|strand=+
 
|strand=+
 
|transcript_name=AK024803
 
|transcript_name=AK024803

Revision as of 04:00, 12 May 2019

Basic information about the TSS


TSS ID:hg_105093.1
Species:human
Chr:chr10
TSS Classification:yes
Start:62049449
End:62049452
Strand:+
TSS Score:1
Start of the center position in the TSS region:62049450
End of the center position in the TSS region:62049451



Gene and protein annotation


Transcript_name:AK024803
Distance:14
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:AK024803
Distance:14
Num_trans:6
All_trans:AK024803:14 BC066345:-207 ENST00000309334.5:-239 NM_001244638:-239 uc001jlu.3:-239 BC015120:-239



TATA-Box annotation


Distance to TSS:240
Nearest PromoterID:NM_001244638
Entrez ID:84159
Nearest Unigene:Hs.535297
Nearest Refseq:NM_032199
Nearest Ensembl:ENSG00000150347
Gene Name:AT-rich interaction domain 5B
Gene Alias:DESRT
Gene Description:AT-rich interaction domain 5B
Gene Type:protein-coding
CpG%:0.03
GC%:0.497512
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):