Difference between revisions of "TSS:Hg 232333.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000373820.5:20 uc057tle.1:20 AK092361:20 |chr=chr10 |cpg_percent=0.01 |distance=20 |distance_to_tss=58310 |end=60082706 |entrez_id=288 |gc_percent...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MRT37= | ||
|all_trans=ENST00000373820.5:20 uc057tle.1:20 AK092361:20 | |all_trans=ENST00000373820.5:20 uc057tle.1:20 AK092361:20 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=58310 | |distance_to_tss=58310 | ||
|end=60082706 | |end=60082706 | ||
| + | |end_of_center_position=62095080 | ||
|entrez_id=288 | |entrez_id=288 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| − | |gene_alias=ANKYRIN-G | + | |gene_alias=ANKYRIN-G |
|gene_description=ankyrin 3 | |gene_description=ankyrin 3 | ||
|gene_id=288 | |gene_id=288 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=60082705 | |start=60082705 | ||
| + | |start_of_center_position=62095079 | ||
|strand=- | |strand=- | ||
|tata_box="80(GCACATAAAAAG,-,0.00)" | |tata_box="80(GCACATAAAAAG,-,0.00)" | ||
Revision as of 04:01, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 62095079 |
|---|---|
| End of the center position in the TSS region: | 62095080 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000373820.5 uc057tle.1 AK092361 |
|---|---|
| Distance: | 20 |
| Num_trans: | 3 |
| All_trans: | ENST00000373820.5:20 uc057tle.1:20 AK092361:20 |
TATA-Box annotation
| Distance to TSS: | 58310 |
|---|---|
| Nearest PromoterID: | NM_001149 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | "ankyrin 3, node of Ranvier (ankyrin G)" |
| Gene Alias: | ANKYRIN-G |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "80(GCACATAAAAAG,-,0.00)" |
