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Difference between revisions of "TSS:Hg 105177.1"

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Line 7: Line 7:
 
|distance_to_tss=-316
 
|distance_to_tss=-316
 
|end=63521057
 
|end=63521057
 +
|end_of_center_position=63521047
 
|entrez_id=221035
 
|entrez_id=221035
 
|gc_percent=0.572139
 
|gc_percent=0.572139
|gene_alias=C10orf74|Yip2b
+
|gene_alias=C10orf74
 
|gene_description=receptor accessory protein 3
 
|gene_description=receptor accessory protein 3
 
|gene_id=221035
 
|gene_id=221035
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=63521036
 
|start=63521036
 +
|start_of_center_position=63521046
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000373758.4 NM_001001330 uc057tnv.1 uc001jmt.3 BC068557
 
|transcript_name=ENST00000373758.4 NM_001001330 uc057tnv.1 uc001jmt.3 BC068557

Revision as of 04:12, 12 May 2019

Basic information about the TSS


TSS ID:hg_105177.1
Species:human
Chr:chr10
TSS Classification:yes
Start:63521036
End:63521057
Strand:+
TSS Score:1
Start of the center position in the TSS region:63521046
End of the center position in the TSS region:63521047



Gene and protein annotation


Transcript_name:ENST00000373758.4 NM_001001330 uc057tnv.1 uc001jmt.3 BC068557
Distance:306
GeneID:221035
HGNC/MGI_ID:HGNC:23711
UniProt_ID:X5DR89 X6R3X1
Gene_name:receptor accessory protein 3
Gene_symbol:REEP3
Gene_synonyms:Yip2b
Gene_source:HGNC:23711



Transcript annotation


Transcript_name:ENST00000373758.4 NM_001001330 uc057tnv.1 uc001jmt.3 BC068557
Distance:306
Num_trans:16
All_trans:ENST00000373758.4:306 NM_001001330:306 uc057tnv.1:306 uc001jmt.3:306 BC068557:306 BC057832:351 BC010040:356 BC038724:394 AK289976:405 AY562241:489 CU686667:489 HQ447522:489 KJ534927:489 KJ535017:489 KJ535031:489 KJ895854:489



TATA-Box annotation


Distance to TSS:-316
Nearest PromoterID:NM_001001330
Entrez ID:221035
Nearest Unigene:Hs.499833
Nearest Refseq:NM_001001330
Nearest Ensembl:ENSG00000165476
Gene Name:receptor accessory protein 3
Gene Alias:C10orf74
Gene Description:receptor accessory protein 3
Gene Type:protein-coding
CpG%:0.04
GC%:0.572139
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):