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Difference between revisions of "TSS:Hg 105207.1"

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Line 6: Line 6:
 
|distance_to_tss=28
 
|distance_to_tss=28
 
|end=66926075
 
|end=66926075
 +
|end_of_center_position=66926062
 
|entrez_id=347731
 
|entrez_id=347731
 
|gc_percent=0.542289
 
|gc_percent=0.542289
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=66926048
 
|start=66926048
 +
|start_of_center_position=66926061
 
|strand=+
 
|strand=+
 
|transcript_name=BX640611
 
|transcript_name=BX640611

Revision as of 04:16, 12 May 2019

Basic information about the TSS


TSS ID:hg_105207.1
Species:human
Chr:chr10
TSS Classification:yes
Start:66926048
End:66926075
Strand:+
TSS Score:1
Start of the center position in the TSS region:66926061
End of the center position in the TSS region:66926062



Gene and protein annotation


Transcript_name:BX640611
Distance:0
GeneID:347731
HGNC/MGI_ID:HGNC:19410
UniProt_ID:
Gene_name:leucine rich repeat transmembrane neuronal 3
Gene_symbol:LRRTM3
Gene_synonyms:
Gene_source:HGNC:19410



Transcript annotation


Transcript_name:BX640611
Distance:0
Num_trans:9
All_trans:BX640611:0 AY358315:3 BC111492:7 NM_178011:-15 ENST00000361320.4:-43 uc001jmz.2:-43 AK290168:426 BC113715:449 BC113717:449



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_178011
Entrez ID:347731
Nearest Unigene:Hs.652155
Nearest Refseq:NM_178011
Nearest Ensembl:ENSG00000198739
Gene Name:leucine rich repeat transmembrane neuronal 3
Gene Alias:-
Gene Description:leucine rich repeat transmembrane neuronal 3
Gene Type:protein-coding
CpG%:0.035
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):