Difference between revisions of "TSS:Hg 232341.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AJ227868:442 |chr=chr10 |cpg_percent=0.02 |distance=442 |distance_to_tss=31977 |end=6234860 |entrez_id=5209 |gc_percent=0.467662 |gene_alias=IPFK2|PFK2|...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PFK2= | ||
|all_trans=AJ227868:442 | |all_trans=AJ227868:442 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=31977 | |distance_to_tss=31977 | ||
|end=6234860 | |end=6234860 | ||
| + | |end_of_center_position=68338523 | ||
|entrez_id=5209 | |entrez_id=5209 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=IPFK2 | + | |gene_alias=IPFK2 |
|gene_description="6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3" | |gene_description="6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3" | ||
|gene_id=5209 | |gene_id=5209 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:8874 | |hgnc_mgi_id=HGNC:8874 | ||
| + | |iPFK-2= | ||
|nearest_ensembl=ENSG00000170525 | |nearest_ensembl=ENSG00000170525 | ||
|nearest_promoter_id=NM_001323017 | |nearest_promoter_id=NM_001323017 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=6234847 | |start=6234847 | ||
| + | |start_of_center_position=68338522 | ||
|strand=+ | |strand=+ | ||
|tata_box="49(GCCTAGATAGGG,-,0.00)" | |tata_box="49(GCCTAGATAGGG,-,0.00)" | ||
Revision as of 04:22, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 68338522 |
|---|---|
| End of the center position in the TSS region: | 68338523 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AJ227868 |
|---|---|
| Distance: | 442 |
| Num_trans: | 1 |
| All_trans: | AJ227868:442 |
TATA-Box annotation
| Distance to TSS: | 31977 |
|---|---|
| Nearest PromoterID: | NM_001323017 |
| Entrez ID: | 5209 |
| Nearest Unigene: | Hs.195471 |
| Nearest Refseq: | NM_004566 |
| Nearest Ensembl: | ENSG00000170525 |
| Gene Name: | "6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3" |
| Gene Alias: | IPFK2 |
| Gene Description: | "6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "49(GCCTAGATAGGG,-,0.00)" |
