Difference between revisions of "TSS:Hg 105301.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=79 | |distance_to_tss=79 | ||
|end=69088117 | |end=69088117 | ||
| + | |end_of_center_position=69088107 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=PPG | + | |gene_alias=PPG |
|gene_description=serglycin | |gene_description=serglycin | ||
|gene_id=5552 | |gene_id=5552 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=69088096 | |start=69088096 | ||
| + | |start_of_center_position=69088106 | ||
|strand=+ | |strand=+ | ||
|tata_box="-34(TTTTCTAAAAGG,-,0.00)" | |tata_box="-34(TTTTCTAAAAGG,-,0.00)" | ||
Revision as of 04:30, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 69088106 |
|---|---|
| End of the center position in the TSS region: | 69088107 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000462445.1 uc057tso.1 D28395 BC022313 AK311873 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000462445.1:0 uc057tso.1:0 D28395:0 BC022313:0 AK311873:0 ENST00000242465.3:1 uc001joz.4:1 BC015516:1 J03223:10 X17042:24 NM_002727:-25 NR_036430:-25 AB528400:40 CU677333:40 KJ897372:40 DQ894620:-191 DQ891442:-191 |
TATA-Box annotation
| Distance to TSS: | 79 |
|---|---|
| Nearest PromoterID: | NM_001321054 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | serglycin |
| Gene Alias: | PPG |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(TTTTCTAAAAGG,-,0.00)" |
