Difference between revisions of "TSS:Hg 105364.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=644 | |distance_to_tss=644 | ||
|end=69802535 | |end=69802535 | ||
| + | |end_of_center_position=69802532 | ||
|entrez_id=1305 | |entrez_id=1305 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=CMS19 | + | |gene_alias=CMS19 |
|gene_description=collagen type XIII alpha 1 chain | |gene_description=collagen type XIII alpha 1 chain | ||
|gene_id=1305 | |gene_id=1305 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=69802528 | |start=69802528 | ||
| + | |start_of_center_position=69802531 | ||
|strand=+ | |strand=+ | ||
|transcript_name=M59217 | |transcript_name=M59217 | ||
Revision as of 04:36, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69802531 |
|---|---|
| End of the center position in the TSS region: | 69802532 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | M59217 |
|---|---|
| Distance: | 17 |
| Num_trans: | 12 |
| All_trans: | M59217:17 ENST00000517713.5:-105 ENST00000522165.5:-105 ENST00000520133.5:-105 uc057tuo.1:-105 uc057tup.1:-105 uc057tuq.1:-105 ENST00000520267.5:-411 ENST00000398969.7:-411 uc057tum.1:-411 uc057tun.1:-411 BC136385:-411 |
TATA-Box annotation
| Distance to TSS: | 644 |
|---|---|
| Nearest PromoterID: | NM_080805 |
| Entrez ID: | 1305 |
| Nearest Unigene: | Hs.695934 |
| Nearest Refseq: | NM_005203 |
| Nearest Ensembl: | ENSG00000197467 |
| Gene Name: | collagen type XIII alpha 1 |
| Gene Alias: | CMS19 |
| Gene Description: | collagen type XIII alpha 1 chain |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
