Difference between revisions of "TSS:Hg 232364.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001171936:-142 NM_001171935:-142 AY563161:-142 AY563162:-142 |chr=chr10 |cpg_percent=0.03 |distance=-142 |distance_to_tss=142 |end=71812025 |entrez_i...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |USH1D= | ||
|all_trans=NM_001171936:-142 NM_001171935:-142 AY563161:-142 AY563162:-142 | |all_trans=NM_001171936:-142 NM_001171935:-142 AY563161:-142 AY563162:-142 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=142 | |distance_to_tss=142 | ||
|end=71812025 | |end=71812025 | ||
| + | |end_of_center_position=72273950 | ||
|entrez_id=64072 | |entrez_id=64072 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=CDHR23 | + | |gene_alias=CDHR23 |
|gene_description=cadherin related 23 | |gene_description=cadherin related 23 | ||
|gene_id=64072 | |gene_id=64072 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=71812024 | |start=71812024 | ||
| + | |start_of_center_position=72273949 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001171936 NM_001171935 AY563161 AY563162 | |transcript_name=NM_001171936 NM_001171935 AY563161 AY563162 | ||
Revision as of 04:59, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 72273949 |
|---|---|
| End of the center position in the TSS region: | 72273950 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001171936 NM_001171935 AY563161 AY563162 |
|---|---|
| Distance: | -142 |
| Num_trans: | 4 |
| All_trans: | NM_001171936:-142 NM_001171935:-142 AY563161:-142 AY563162:-142 |
TATA-Box annotation
| Distance to TSS: | 142 |
|---|---|
| Nearest PromoterID: | NM_001171936 |
| Entrez ID: | 64072 |
| Nearest Unigene: | Hs.656032 |
| Nearest Refseq: | NM_022124 |
| Nearest Ensembl: | ENSG00000107736 |
| Gene Name: | cadherin-related 23 |
| Gene Alias: | CDHR23 |
| Gene Description: | cadherin related 23 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
